Evidence map›Paper›PMID 29386330›Full record

ArticleGenes & development2018

SAM68 is required for regulation of Pumilio by the NORAD long noncoding RNA.

Ailone Tichon, Rotem Ben-Tov Perry, Lovorka Stojic, Igor Ulitsky

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
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  6. Article
  7. Expression ofMolecular therapy. Nucleic acids · 2023
    Article
  8. Review
  9. Article
  10. Review
  11. The Role of Non-Coding RNAs in Chromosomal Instability in Cancer.The Journal of pharmacology and experimental therapeutics · 2023
    Review
  12. A mechanistic view of long noncoding RNAs in cancer.Wiley interdisciplinary reviews. RNA · 2022
    Review
  13. Review
  14. Review
  15. Review
  16. Review
  17. lncRNAInternational journal of molecular medicine · 2021
    Article
  18. Noncoding RNAs: biology and applications-a Keystone Symposia report.Annals of the New York Academy of Sciences · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ailone Tichon *Department of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.
Rotem Ben-Tov Perry *Department of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.
Lovorka StojicCancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge CB2 0RE, United Kingdom.ORCID 0000-0001-6691-3396
Igor UlitskyDepartment of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.ORCID 0000-0003-0555-6561
Weizmann Institute of Science · ILUniversity of Cambridge · GB

Funding

Cancer Research UK 17043Cancer Research UK C14303/A17043
6 · The paper itself

Abstract

The number of known long noncoding RNA (lncRNA) functions is rapidly growing, but how those functions are encoded in their sequence and structure remains poorly understood. NORAD (noncoding RNA activated by DNA damage) is a recently characterized, abundant, and highly conserved lncRNA that is required for proper mitotic divisions in human cells. NORAD acts in the cytoplasm and antagonizes repressors from the Pumilio family that bind at least 17 sites spread through 12 repetitive units in NORAD sequence. Here we study conserved sequences in NORAD repeats, identify additional interacting partners, and characterize the interaction between NORAD and the RNA-binding protein SAM68 (KHDRBS1), which is required for NORAD function in antagonizing Pumilio. These interactions provide a paradigm for how repeated elements in a lncRNA facilitate function.

Indexed as

3' Untranslated RegionsAdaptor Proteins, Signal TransducingBinding SitesCell Line, TumorChromosome SegregationDNA-Binding ProteinsGene Expression RegulationHumansRepressor ProteinsRNA-Binding ProteinsRNA, Long NoncodingRNA, Messenger3' Untranslated RegionsAdaptor Proteins, Signal TransducingDNA-Binding ProteinsKHDRBS1 protein, humanNORAD long non-coding RNA, humanPUM1 protein, humanPUM2 protein, humanRepressor ProteinsRNA-Binding ProteinsRNA, Long NoncodingRNA, Messengerlong noncoding RNAsNORADpost-transcriptional regulationPumilioSAM68

Identifiers

PMID29386330
PMCPMC5828396
OpenAlexW2786696891

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.