Evidence map›Paper›PMID 29383466›Full record

ArticleJournal of computer-aided molecular design2018

Structure-based drug design, synthesis and biological assays of P. falciparum Atg3-Atg8 protein-protein interaction inhibitors.

Stefania Villa, Laura Legnani, Diego Colombo, Arianna Gelain, Carmen Lammi, Daniele Bongiorno, Denise P Ilboudo, Kellen E McGee, Jürgen Bosch, Giovanni Grazioso

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  6. Review
  7. Inhibition of PCSK9ACS medicinal chemistry letters · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Stefania VillaDipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, Via L. Mangiagalli 25, 20133, Milan, Italy.ORCID 0000-0002-0636-7589
Laura LegnaniDipartimento di Chimica, Università degli Studi di Pavia, Via Taramelli 12, 27100, Pavia, Italy.ORCID 0000-0002-3236-0364
Diego ColomboDipartimento di Biotecnologie Mediche e Medicina Traslazionale, Università degli Studi di Milano, Via Saldini 50, 20133, Milano, Italy.ORCID 0000-0003-1436-2304
Arianna GelainDipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, Via L. Mangiagalli 25, 20133, Milan, Italy.ORCID 0000-0001-9104-732X
Carmen LammiDipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, Via L. Mangiagalli 25, 20133, Milan, Italy.ORCID 0000-0002-7428-4486
Daniele BongiornoDipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, Via L. Mangiagalli 25, 20133, Milan, Italy.ORCID 0000-0002-9756-2768
Denise P IlboudoDipartimento di Scienze Farmacologiche e Biomolecolari, Università degli Studi di Milano, Via Balzaretti 9, 20133, Milano, Italy.ORCID 0000-0002-3315-356X
Kellen E McGeePediatric Pulmonology Division, Department of Pediatrics, Case Western Reserve University School of Medicine, Cleveland, OH, USA.
Jürgen BoschPediatric Pulmonology Division, Department of Pediatrics, Case Western Reserve University School of Medicine, Cleveland, OH, USA.ORCID 0000-0002-2624-4105
Giovanni GraziosoDipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, Via L. Mangiagalli 25, 20133, Milan, Italy. giovanni.grazioso@unimi.it.ORCID 0000-0002-3261-9356
University of Milan · ITUniversity School · USUniversité Joseph Ki-Zerbo · BFUniversity of Pavia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The proteins involved in the autophagy (Atg) pathway have recently been considered promising targets for the development of new antimalarial drugs. In particular, inhibitors of the protein-protein interaction (PPI) between Atg3 and Atg8 of Plasmodium falciparum retarded the blood- and liver-stages of parasite growth. In this paper, we used computational techniques to design a new class of peptidomimetics mimicking the Atg3 interaction motif, which were then synthesized by click-chemistry. Surface plasmon resonance has been employed to measure the ability of these compounds to inhibit the Atg3-Atg8 reciprocal protein-protein interaction. Moreover, P. falciparum growth inhibition in red blood cell cultures was evaluated as well as the cyto-toxicity of the compounds.

Indexed as

AntimalarialsAutophagyAutophagy-Related ProteinsCell SurvivalDrug DesignHep G2 CellsHumansMolecular Docking SimulationMolecular Dynamics SimulationPeptidomimeticsPlasmodium falciparumProtein BindingProtozoan ProteinsStructure-Activity RelationshipTriazolesAntimalarialsAutophagy-Related ProteinsPeptidomimeticsProtozoan ProteinsTriazoles1,2,3-TriazoleAtg8 inhibitorsAutophagyDockingMalariaPeptidomimeticsPPI inhibitors

Identifiers

PMID29383466
OpenAlexW2785550929

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.