Evidence map›Paper›PMID 29383145›Full record

ArticleOncotarget2017

Discovering drugs to overcome chemoresistance in ovarian cancers based on the cancer genome atlas tumor transcriptome profile.

Fan Wang, Jeremy T-H Chang, Zhenyu Zhang, Gladys Morrison, Aritro Nath, Steven Bhutra, Rong Stephanie Huang

Abstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fan WangSection of Hematology/Oncology, Department of Medicine, University of Chicago, Chicago, IL, USA.
Jeremy T-H ChangBiological Sciences Collegiate Division, University of Chicago, Chicago, IL, USA.
Zhenyu ZhangCenter for Data Intensive Science, University of Chicago, Chicago, IL, USA.
Gladys MorrisonSection of Hematology/Oncology, Department of Medicine, University of Chicago, Chicago, IL, USA.
Aritro NathSection of Hematology/Oncology, Department of Medicine, University of Chicago, Chicago, IL, USA.
Steven BhutraSection of Hematology/Oncology, Department of Medicine, University of Chicago, Chicago, IL, USA.
Rong Stephanie HuangSection of Hematology/Oncology, Department of Medicine, University of Chicago, Chicago, IL, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ovarian cancer accounts for the highest mortality among gynecologic cancers, mainly due to intrinsic or acquired chemoresistance. While mechanistic-based methods have been used to identify compounds that can overcome chemoresistance, an effective comprehensive drug screening has yet to be developed. We applied a transcriptome based drug sensitivity prediction method, to the Cancer Genome Atlas (TCGA) ovarian cancer dataset to impute patient tumor response to over 100 different drugs. By stratifying patients based on their predicted response to standard of care (SOC) chemotherapy, we identified drugs that are likely more sensitive in SOC resistant ovarian tumors. Five drugs (ABT-888, BIBW2992, gefitinib, AZD6244 and lenalidomide) exhibit higher efficacy in SOC resistant ovarian tumors when multi-platform of transcriptome profiling methods were employed. Additional

Indexed as

chemoresistancedrug repurposingovarian cancerpharmacogenomicsTCGA

Identifiers

PMID29383145
PMCPMC5777757

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.