ArticleScientific reports2018
Peach RNA viromes in six different peach cultivars.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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38 citing papers in PubMed, 68 citations in OpenAlex.
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- Comprehensive virome profiling of sugarcane and simplified duplex OneStep RT-PCR assay reveals the prevalence of sugarcane streak mosaic virus along with sugarcane yellow leaf virus in India.Journal, genetic engineering & biotechnology · 2024Article
- Comprehensive Metatranscriptomic Analysis of Plant Viruses in Imported Frozen Cherries and Blueberries.The plant pathology journal · 2024Article
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- Viral Metatranscriptomic Analysis to Reveal the Diversity of Viruses Infecting Satsuma Mandarin (Citrus unshiu) in Korea.The plant pathology journal · 2024Article
- Application of High-Throughput Sequencing for Comprehensive Virome Profiling in Grapevines Shows Yellows in Iran.Viruses · 2024Article
- Meta-transcriptomic analysis reveals the geographical expansion of known sugarbeet-infecting viruses and the occurrence of a novel virus in sugarbeet in the United States.Frontiers in plant science · 2024Article
- Variability of plant transcriptomic responses under stress acclimation: a review from high throughput studies.Acta biochimica Polonica · 2024Review
- Complete Genome Sequence of a Novel MonopartitePlants (Basel, Switzerland) · 2022Article
- Viromes of Hungarian Peach Trees Identified by High-Throughput Sequencing of Small RNAs.Plants (Basel, Switzerland) · 2022Article
- Metatranscriptomic Analysis of Plant Viruses in Imported Pear and Kiwifruit Pollen.The plant pathology journal · 2022Article
- High-Throughput RNA Sequencing of Mosaic Infected and Non-Infected Apple (Plants (Basel, Switzerland) · 2022Article
- Bacteriophages Roam the Wheat Phyllosphere.Viruses · 2022Article
- Identification of Viruses Infecting Oats in Korea by Metatranscriptomics.Plants (Basel, Switzerland) · 2022Article
- Comparison of Potato Viromes Between Introduced and Indigenous Varieties.Frontiers in microbiology · 2022Article
- Towards the Forest Virome: High-Throughput Sequencing Drastically Expands Our Understanding on Virosphere in Temperate Forest Ecosystems.Microorganisms · 2021Review
- The Sisal Virome: Uncovering the Viral Diversity ofMicroorganisms · 2021Article
- Identification of Plant Viruses Infecting Pear Using RNA Sequencing.The plant pathology journal · 2021Article
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Authors and funding
10 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Many recent studies have demonstrated that several known and unknown viruses infect many horticultural plants. However, the elucidation of a viral population and the understanding of the genetic complexity of viral genomes in a single plant are rarely reported. Here, we conducted metatranscriptome analyses using six different peach trees representing six individual peach cultivars. We identified six viruses including five viruses in the family Betaflexiviridae and a novel virus belonging to the family Tymoviridae as well as two viroids. The number of identified viruses and viroids in each transcriptome ranged from one to six. We obtained 18 complete or nearly complete genomes for six viruses and two viroids using transcriptome data. Furthermore, we analyzed single nucleotide variations for individual viral genomes. In addition, we analyzed the amount of viral RNA and copy number for identified viruses and viroids. Some viruses or viroids were commonly present in different cultivars; however, the list of infected viruses and viroids in each cultivar was different. Taken together, our study reveals the viral population in a single peach tree and a comprehensive overview for the diversities of viral communities in different peach cultivars.
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