Evidence map›Paper›PMID 29382762›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Oxidation of dCTP contributes to antibiotic lethality in stationary-phase mycobacteria.

Xiao-Yong Fan, Bi-Kui Tang, Yuan-Yuan Xu, Ang-Xuan Han, Kun-Xiong Shi, Yong-Kai Wu, Yu Ye, Mei-Li Wei, Chen Niu, Ka-Wing Wong and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 56 citations in OpenAlex.

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  19. Clinically encountered growth phenotypes of tuberculosis-causing bacilli and theirFrontiers in cellular and infection microbiology · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Xiao-Yong FanKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China.
Bi-Kui TangDepartment of Life Science, Anhui Key Laboratory of Infection and Immunity, Bengbu Medical College, 233030 Bengbu, China.
Yuan-Yuan XuKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China.
Ang-Xuan HanKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China.
Kun-Xiong ShiKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China.
Yong-Kai WuKey Laboratory of Medical Molecular Virology of MOE/MOH, Department of Microbiology, School of Life Sciences, Fudan University, 200433 Shanghai, China.
Yu YeDepartment of Microbiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, New Territories, 999077 Hong Kong SAR, China.
Mei-Li WeiDepartment of Life Science, Anhui Key Laboratory of Infection and Immunity, Bengbu Medical College, 233030 Bengbu, China.
Chen NiuKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China.
Ka-Wing WongKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China.
Guo-Ping ZhaoKey Laboratory of Medical Molecular Virology of MOE/MOH, Department of Microbiology, School of Life Sciences, Fudan University, 200433 Shanghai, China; gpzhao@sibs.ac.cn liangdong.lv@gmail.com.
Liang-Dong LyuKey Laboratory of Medical Molecular Virology of the Ministry of Education/Ministry of Health (MOE/MOH), Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, 200032 Shanghai, China; gpzhao@sibs.ac.cn liangdong.lv@gmail.com.ORCID 0000-0001-6391-6030
Fudan University · CNBengbu Medical College · CNChinese University of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Growing evidence shows that generation of reactive oxygen species (ROS) derived from antibiotic-induced metabolic perturbation contribute to antibiotic lethality. However, our knowledge of the mechanisms by which antibiotic-induced oxidative stress actually kills cells remains elusive. Here, we show that oxidation of dCTP underlies ROS-mediated antibiotic lethality via induction of DNA double-strand breaks (DSBs). Deletion of

Indexed as

Anti-Bacterial AgentsDeoxycytosine NucleotidesDNA, BacterialDNA DamageDNA-Directed DNA PolymeraseGene DeletionGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicHumansMacrophagesMycobacterium smegmatisMycobacterium tuberculosisOxidation-ReductionPyrophosphatasesReactive Oxygen Species2'-deoxycytidine 5'-triphosphateAnti-Bacterial AgentsDeoxycytosine NucleotidesDNA, BacterialDNA-Directed DNA PolymerasePyrophosphatasesReactive Oxygen Species5-OH-dCTPantibioticDNA double-strand breaksMycobacteriumreactive oxygen species

Identifiers

PMID29382762
PMCPMC5834715
OpenAlexW2790000240

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.