Evidence map›Paper›PMID 29381728›Full record

ArticlePloS one2018

M60-like metalloprotease domain of the Escherichia coli YghJ protein forms amyloid fibrils.

Mikhail V Belousov, Stanislav A Bondarev, Anastasiia O Kosolapova, Kirill S Antonets, Anna I Sulatskaya, Maksim I Sulatsky, Galina A Zhouravleva, Irina M Kuznetsova, Konstantin K Turoverov, Anton A Nizhnikov

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. The toxins of vertically transmittedFrontiers in microbiology · 2023
    Article
  3. Article
  4. Review
  5. Review
  6. Two putative zinc metalloproteases contribute to the virulence ofJournal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2020
    Article
  7. Repertoire of theToxins · 2019
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Mikhail V BelousovDepartment of Genetics and Biotechnology, St. Petersburg State University, Universitetskaya nab., St. Petersburg, Russian Federation.
Stanislav A BondarevDepartment of Genetics and Biotechnology, St. Petersburg State University, Universitetskaya nab., St. Petersburg, Russian Federation.
Anastasiia O KosolapovaDepartment of Genetics and Biotechnology, St. Petersburg State University, Universitetskaya nab., St. Petersburg, Russian Federation.
Kirill S AntonetsDepartment of Genetics and Biotechnology, St. Petersburg State University, Universitetskaya nab., St. Petersburg, Russian Federation.
Anna I SulatskayaInstitute of Cytology, Russian Academy of Science, St. Petersburg, Russian Federation.
Maksim I SulatskyInstitute of Cytology, Russian Academy of Science, St. Petersburg, Russian Federation.
Galina A ZhouravlevaDepartment of Genetics and Biotechnology, St. Petersburg State University, Universitetskaya nab., St. Petersburg, Russian Federation.
Irina M KuznetsovaInstitute of Cytology, Russian Academy of Science, St. Petersburg, Russian Federation.
Konstantin K TuroverovInstitute of Cytology, Russian Academy of Science, St. Petersburg, Russian Federation.
Anton A NizhnikovDepartment of Genetics and Biotechnology, St. Petersburg State University, Universitetskaya nab., St. Petersburg, Russian Federation.ORCID 0000-0002-8338-3494
St Petersburg University · RUInstitute of Cytology · RUPeter the Great St. Petersburg Polytechnic University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amyloids are protein fibrils with a characteristic spatial structure. Amyloids were long perceived as the pathogens involved in a set of lethal diseases in humans and animals. In recent decades, it has become clear that amyloids represent a quaternary protein structure that is not only pathological but also functionally important and is widely used by different organisms, ranging from archaea to animals, to implement diverse biological functions. The greatest biological variety of amyloids is found in prokaryotes, where they control the formation of biofilms and cell wall sheaths, facilitate the overcoming of surface tension, and regulate the metabolism of toxins. Several amyloid proteins were identified in the important model, biotechnological and pathogenic bacterium Escherichia coli. In previous studies, using a method for the proteomic screening and identification of amyloids, we identified 61 potentially amyloidogenic proteins in the proteome of E. coli. Among these proteins, YghJ was the most enriched with bioinformatically predicted amyloidogenic regions. YghJ is a lipoprotein with a zinc metalloprotease M60-like domain that is involved in mucin degradation in the intestine as well as in proinflammatory responses. In this study, we analyzed the amyloid properties of the YghJ M60-like domain and demonstrated that it forms amyloid-like fibrils in vitro and in vivo.

Indexed as

Protein MultimerizationAmyloidEscherichia coli ProteinsMetalloproteasesProtein DomainsProtein Structure, SecondaryAmyloidEscherichia coli ProteinsMetalloproteasesYghJ protein, E coli

Identifiers

PMID29381728
PMCPMC5790219
OpenAlexW2790534374

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.