Evidence map›Paper›PMID 29380029›Full record

ArticleMicrobial ecology2018

Microbial Diversity of Hypersaline Sediments from Lake Lucero Playa in White Sands National Monument, New Mexico, USA.

Kosala Ayantha Sirisena, Steven Ramirez, Andrew Steele, Mihaela Glamoclija

Abstract read
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In one paragraph

Article in Microbial ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kosala Ayantha SirisenaDepartment of Earth and Environmental Sciences, Rutgers University, Newark, NJ, USA. kosala.sirisena@gmail.com.ORCID http://orcid.org/0000-0001-5748-4120
Steven RamirezDepartment of Earth and Environmental Sciences, Rutgers University, Newark, NJ, USA.
Andrew SteeleGeophysical Laboratory, Carnegie Institution of Washington, Washington, DC, USA.
Mihaela GlamoclijaDepartment of Earth and Environmental Sciences, Rutgers University, Newark, NJ, USA.

Funding

National Aeronautics and Space Administration NASA-ASTEP NNX14AT28G
6 · The paper itself

Abstract

Lake Lucero is a gypsum-rich, hypersaline, ephemeral playa located on the southern part of the Alkali Flat at the White Sands National Monument (WSNM), New Mexico, USA. This modern playa setting provides a dynamic extreme environment that changes from a freshwater lake to a hypersaline dry desert during the year. We investigated the microbial diversity (bacteria, archaea, and microbial eukaryotes) of the Lake Lucero sediments using 16S- and 18S-based amplicon sequencing approach and explored the diversity patterns in different geochemical microenvironments. Our results indicated that similar microbial communities, in particular bacterial communities colonized, were remarkably consistent across our depth profiles. Therefore, these communities show a first-order relevance on the environmental conditions (moisture content, oxygen content, and mineral composition). We found that Proteobacteria, Actinobacteria, Bacteroidetes, Firmicutes, and Gemmatimonadetes were the major bacterial phyla, while Cyanobacteria were present in relatively low abundances and appeared only at the surface. Genus level assessment reflected that Truepera, Delftia, and Pseudomonas were the predominant bacterial genera across all samples. Euryarchaeota was the major archaeal phylum in all the samples, while Candidatus Halobonum and Candidatus Nitrososphaera were the main genera. Diatoms were the dominant eukaryotic group in surface samples and Fungi, Ciliophora, Metazoa, and Nematodes were the other major groups. As expected, metabolic inference indicated that aerobic microbial communities were near surface colonizers, with anaerobic communities dominating with increasing depth. We demonstrated that these microbial communities could be used to characterize unique geochemical microenvironments enabling us to extrapolate these results into other terrestrial and possibly extraterrestrial environments with comparable geochemical characteristics.

Indexed as

BiodiversityExtreme EnvironmentsMicrobiotaPhylogenyWater MicrobiologyArchaeaBacteriaCluster AnalysisDNA, ArchaealDNA, BacterialEukaryotaGeologic SedimentsLakesNew MexicoRNA, Ribosomal, 16SRNA, Ribosomal, 18SDNA, ArchaealDNA, BacterialRNA, Ribosomal, 16SRNA, Ribosomal, 18SArchaeaBacteriaEukaryotic microbesGypsiferousHypersaline sedimentLake LuceroMicrobial diversity

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.