Evidence map›Paper›PMID 29379199›Full record

ArticleNature genetics2018

Enhancer invasion shapes MYCN-dependent transcriptional amplification in neuroblastoma.

Rhamy Zeid, Matthew A Lawlor, Evon Poon, Jaime M Reyes, Mariateresa Fulciniti, Michael A Lopez, Thomas G Scott, Behnam Nabet, Michael A Erb, Georg E Winter and 9 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 152 papers.

0numbers the graph read from it
0cells of the map it votes in
152citing papers in PubMed
20.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

152 citing papers in PubMed, 241 citations in OpenAlex.

  1. Article
  2. Targeting MYC-Driven Cancers: From Oncogenic Addiction to Therapeutic Vulnerability.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2026
    Review
  3. Article
  4. Elevated MyoD1 levels expand genome-wide binding and the repertoire of regulated genes.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Epigenetic crosstalk in neuroblastoma development and progression.Frontiers in cell and developmental biology · 2026
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

92 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Commented on by
    2018
5 · Who and what money

Authors and funding

19 authors at 4 institutions in 3 countries.

Rhamy ZeidDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Matthew A LawlorDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Evon PoonDivision of Clinical Studies, The Institute of Cancer Research, London, UK.
Jaime M ReyesDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Mariateresa FulcinitiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Michael A LopezDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Thomas G ScottDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Behnam NabetDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-6738-4200
Michael A ErbDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0001-9993-3481
Georg E WinterDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Zoe JacobsonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Donald R PolaskiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Kristen L KarlinDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Rachel A HirschDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Nikhil P MunshiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Thomas F WestbrookDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Louis CheslerDivision of Clinical Studies, The Institute of Cancer Research, London, UK.ORCID http://orcid.org/0000-0001-7842-2068
Charles Y LinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. charles.y.lin@bcm.edu.ORCID http://orcid.org/0000-0002-9155-090X
James E BradnerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. james.bradner@novartis.com.ORCID http://orcid.org/0000-0002-2718-4415
Dana-Farber Cancer Institute · USBaylor College of Medicine · USInstitute of Cancer Research · GBNovartis (China) · CN

Funding

Targeting Genomic Instability and Evolution in MyelomaP01CA155258 · NCI · DANA-FARBER CANCER INST · PI Jill Corre · 2011 to 2026
$32.5M
PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
Identifying and Targeting Onocgenic MYC Enhancer Control in Pediatric TumorsR01CA215452 · NCI · BAYLOR COLLEGE OF MEDICINE · PI WESTBROOK, THOMAS · 2017 to 2021
$2.0M
Cancer Research UK 18339NCI NIH HHS P01 CA155258NCI NIH HHS R01 CA215452NIGMS NIH HHS T32 GM008307
6 · The paper itself

Abstract

Amplification of the locus encoding the oncogenic transcription factor MYCN is a defining feature of high-risk neuroblastoma. Here we present the first dynamic chromatin and transcriptional landscape of MYCN perturbation in neuroblastoma. At oncogenic levels, MYCN associates with E-box binding motifs in an affinity-dependent manner, binding to strong canonical E-boxes at promoters and invading abundant weaker non-canonical E-boxes clustered at enhancers. Loss of MYCN leads to a global reduction in transcription, which is most pronounced at MYCN target genes with the greatest enhancer occupancy. These highly occupied MYCN target genes show tissue-specific expression and are linked to poor patient survival. The activity of genes with MYCN-occupied enhancers is dependent on the tissue-specific transcription factor TWIST1, which co-occupies enhancers with MYCN and is required for MYCN-dependent proliferation. These data implicate tissue-specific enhancers in defining often highly tumor-specific 'MYC target gene signatures' and identify disruption of the MYCN enhancer regulatory axis as a promising therapeutic strategy in neuroblastoma.

Indexed as

Binding SitesCell Line, TumorChromatinEnhancer Elements, GeneticGene AmplificationGenes, mycHumansKineticsNeuroblastomaN-Myc Proto-Oncogene ProteinNuclear ProteinsOncogenesPromoter Regions, GeneticTwist-Related Protein 1ChromatinMYCN protein, humanN-Myc Proto-Oncogene ProteinNuclear ProteinsTWIST1 protein, humanTwist-Related Protein 1

Identifiers

PMID29379199
PMCPMC6310397
OpenAlexW2788562722

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.