Evidence map›Paper›PMID 29379172›Full record

ArticleNature structural & molecular biology2018

Solution structure and elevator mechanism of the membrane electron transporter CcdA.

Yunpeng Zhou, John H Bushweller

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  5. Review
  6. Article
  7. Article
  8. Solvent accessibility changes in a NaThe Journal of biological chemistry · 2020
    Article
  9. Review
  10. Review
  11. Elevator-type mechanisms of membrane transport.Biochemical Society transactions · 2020
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yunpeng ZhouDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA, USA. yz8w@virginia.edu.ORCID http://orcid.org/0000-0002-5550-8974
John H BushwellerDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA, USA. jhb4v@virginia.edu.ORCID http://orcid.org/0000-0002-5386-1758
University of Virginia · US

Funding

Solution NMR Structure and Function of the Integral Membrane Protein DsbBR01GM078296 · NIGMS · UNIVERSITY OF VIRGINIA · PI BUSHWELLER, JOHN HACKETT · 2006 to 2013
$2.8M
NIGMS NIH HHS R01 GM078296
6 · The paper itself

Abstract

Membrane oxidoreductase CcdA plays a central role in supplying reducing equivalents from the bacterial cytoplasm to the envelope. It transports electrons across the membrane using a single pair of cysteines by a mechanism that has not yet been elucidated. Here we report an NMR structure of the Thermus thermophilus CcdA (TtCcdA) in an oxidized and outward-facing state. CcdA consists of two inverted structural repeats of three transmembrane helices (2 × 3-TM). We computationally modeled and experimentally validated an inward-facing state, which suggests that CcdA uses an elevator-type movement to shuttle the reactive cysteines across the membrane. CcdA belongs to the LysE superfamily, and thus its structure may be relevant to other LysE clan transporters. Structure comparisons of CcdA, semiSWEET, Pnu, and major facilitator superfamily (MFS) transporters provide insights into membrane transporter architecture and mechanism.

Indexed as

Archaeoglobus fulgidusBacterial ProteinsCell MembraneCross-Linking ReagentsCysteineMagnetic Resonance SpectroscopyMembrane Transport ProteinsModels, MolecularOxidation-ReductionOxidoreductasesProtein BindingProtein Structure, SecondaryProtein TransportSolventsThermus thermophilusBacterial ProteinsCcdA protein, BacteriaCross-Linking ReagentsCysteineMembrane Transport ProteinsOxidoreductasesSolvents

Identifiers

PMID29379172
PMCPMC5805637
OpenAlexW2786787899

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.