Evidence map›Paper›PMID 29377467›Full record

ArticlePlant biotechnology journal2018

WRKY1 acts as a key component improving resistance against Alternaria solani in wild tomato, Solanum arcanum Peralta.

Balkrishna A Shinde, Bhushan B Dholakia, Khalid Hussain, Asaph Aharoni, Ashok P Giri, Avinash C Kamble

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Balkrishna A ShindeDepartment of Botany, Savitribai Phule Pune University (Formerly University of Pune), Pune, India.
Bhushan B DholakiaDivision of Biochemical Sciences, Plant Molecular Biology Unit, CSIR-National Chemical Laboratory, Pune, India.
Khalid HussainDepartment of Botany, Savitribai Phule Pune University (Formerly University of Pune), Pune, India.
Asaph AharoniDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Ashok P GiriDivision of Biochemical Sciences, Plant Molecular Biology Unit, CSIR-National Chemical Laboratory, Pune, India.
Avinash C KambleDepartment of Botany, Savitribai Phule Pune University (Formerly University of Pune), Pune, India.ORCID 0000-0003-4080-8031
National Chemical Laboratory · INSavitribai Phule Pune University · INWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Early blight (EB), caused by Alternaria solani, is a major threat to global tomato production. In comparison with cultivated tomato (Solanum lycopersicum), a wild relative, S. arcanum exhibits strong resistance against EB. However, molecular cascades operating during EB resistance in wild or cultivated tomato plants are largely obscure. Here, we provide novel insight into spatio-temporal molecular events in S. arcanum against A. solani. Transcriptome and co-expression analysis presented 33-WRKYs as promising candidates of which 12 SaWRKYs displayed differential expression patterns in resistant and susceptible accessions during EB disease progression. Among these, SaWRKY1 exhibited induced expression with significant modulation in xyloglucan endotrans hydrolase 5 (XTH5) and MYB2 expressions that correlated with the disease phenotypes. Electro-mobility shift assay confirmed physical interaction of recombinant SaWRKY1 to SaXTH5 and SaMYB2 promoters. Comparative WRKY1 promoter analysis between resistant and susceptible plants revealed the presence of crucial motifs for defence mechanism exclusively in resistant accession. Additionally, many defence-related genes displayed significant expression variations in both the accessions. Further, WRKY1 overexpressing transgenic plants exhibited higher levels of EB resistance while RNAi silencing lines had increased susceptibility to A. solani with altered expression of XTH5 and MYB2. Overall, these findings demonstrate the positive influence of WRKY1 in improving EB resistance in wild tomato and this could be further utilized as a potential target through genetic engineering to augment protection against A. solani in crop plants.

Indexed as

AlternariaGene Expression Regulation, PlantPlant DiseasesPlant ProteinsPlants, Genetically ModifiedSolanumSolanum lycopersicumPlant ProteinsAlternaria solaniearly blightSolanum arcanumTomatoWRKY1XTH5

Identifiers

PMID29377467
PMCPMC6041441
OpenAlexW2791570832

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.