Evidence map›Paper›PMID 29375987›Full record

ArticleInternational journal of ophthalmology2018

A novel mutation in

Yu Zheng, Hai-Lin Wang, Jian-Kang Li, Li Xu, Laurent Tellier, Xiao-Lin Li, Xiao-Yan Huang, Wei Li, Tong-Tong Niu, Huan-Ming Yang and 2 more

Abstract read
In one paragraph

Article in International journal of ophthalmology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. A novel mutation in the PRPF31 in a North Indian adRP family with incomplete penetrance.Documenta ophthalmologica. Advances in ophthalmology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yu ZhengBGI Education Center, University of Chinese Academy of Sciences, Shenzhen 518083, China.
Hai-Lin WangThe Fourth People's Hospital of Shenyang, Shenyang 110031, Liaoning Province, China.
Jian-Kang LiBGI-Shenzhen, Shenzhen 518083, China.
Li XuThe Fourth People's Hospital of Shenyang, Shenyang 110031, Liaoning Province, China.
Laurent TellierBGI-Shenzhen, Shenzhen 518083, China.
Xiao-Lin LiThe Fourth People's Hospital of Shenyang, Shenyang 110031, Liaoning Province, China.
Xiao-Yan HuangBGI Education Center, University of Chinese Academy of Sciences, Shenzhen 518083, China.
Wei LiBGI-Shenzhen, Shenzhen 518083, China.
Tong-Tong NiuThe Fourth People's Hospital of Shenyang, Shenyang 110031, Liaoning Province, China.
Huan-Ming YangBGI-Shenzhen, Shenzhen 518083, China.
Jian-Guo ZhangBGI-Shenzhen, Shenzhen 518083, China.
Dong-Ning LiuThe Fourth People's Hospital of Shenyang, Shenyang 110031, Liaoning Province, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo study the genes responsible for retinitis pigmentosa.

methodsA total of 15 Chinese families with retinitis pigmentosa, containing 94 sporadically afflicted cases, were recruited. The targeted sequences were captured using the Target_Eye_365_V3 chip and sequenced using the BGISEQ-500 sequencer, according to the manufacturer's instructions. Data were aligned to UCSC Genome Browser build hg19, using the Burroughs Wheeler Aligner MEM algorithm. Local realignment was performed with the Genome Analysis Toolkit (GATK v.3.3.0) IndelRealigner, and variants were called with the Genome Analysis Toolkit Haplotypecaller, without any use of imputation. Variants were filtered against a panel derived from 1000 Genomes Project, 1000G_ASN, ESP6500, ExAC and dbSNP138. In all members of Family ONE and Family TWO with available DNA samples, the genetic variant was validated using Sanger sequencing.

resultsA novel, pathogenic variant of retinitis pigmentosa, c.357_358delAA (p.Ser119SerfsX5) was identified in

conclusionADRP is a subtype of retinitis pigmentosa, defined by its genotype, which accounts for 20%-40% of the retinitis pigmentosa patients. Our study thus expands the spectrum of

Indexed as

BGISEQ-500PRPF31retinitis pigmentosa

Identifiers

PMID29375987
PMCPMC5767654

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.