Evidence map›Paper›PMID 29374778›Full record

ArticleCurrent genetics2018

Respiratory deficiency in yeast mevalonate kinase deficient may explain MKD-associate metabolic disorder in humans.

Manuella Maria Silva Santos, Carolina Elsztein, Rafael Barros De Souza, Sérgio de Sá Leitão Paiva, Jaqueline Azevêdo Silva, Sergio Crovella, Marcos Antonio De Morais

Abstract read
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In one paragraph

Article in Current genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Manuella Maria Silva SantosInterdepartmental Research Group in Metabolic Engineering, Federal University of Pernambuco, Avenida Moraes Rego, No. 1235, Recife, PE, 50760-901, Brazil.
Carolina ElszteinInterdepartmental Research Group in Metabolic Engineering, Federal University of Pernambuco, Avenida Moraes Rego, No. 1235, Recife, PE, 50760-901, Brazil.
Rafael Barros De SouzaInterdepartmental Research Group in Metabolic Engineering, Federal University of Pernambuco, Avenida Moraes Rego, No. 1235, Recife, PE, 50760-901, Brazil.
Sérgio de Sá Leitão PaivaLaboratory of Bioinformatics and Evolutionary Biology, Federal Rural University Pernambuco, Rua Dom Manoel de Medeiros, s/n, Recife, PE, 52171-900, Brazil.
Jaqueline Azevêdo SilvaDepartment of Genetics, Federal University of Pernambuco, Avenida Moraes Rego, No. 1235, Cidade Universitária, Recife, PE, 50760-901, Brazil.
Sergio CrovellaDepartment of Genetics, Federal University of Pernambuco, Avenida Moraes Rego, No. 1235, Cidade Universitária, Recife, PE, 50760-901, Brazil.
Marcos Antonio De MoraisInterdepartmental Research Group in Metabolic Engineering, Federal University of Pernambuco, Avenida Moraes Rego, No. 1235, Recife, PE, 50760-901, Brazil. marcos.moraisjr@ufpe.com.ORCID http://orcid.org/0000-0002-9727-0300
Universidade Federal de Pernambuco · BRUniversidade Federal Rural de Pernambuco · BR

Funding

IRCCS Burlo Garofolo RC42/11
6 · The paper itself

Abstract

Mevalonate kinase deficiency (MKD) an orphan drug rare disease affecting humans with different clinical presentations, is still lacking information about its pathogenesis; no animal or cell model mimicking the genetic defect, mutations at MVK gene, and its consequences on the mevalonate pathway is available. Trying to clarify the effects of MVK gene impairment on the mevalonate pathway we used a yeast model, the erg12-d mutant strain Saccharomyces cerevisiae (orthologous of MKV) retaining only 10% of mevalonate kinase (MK) activity, to describe the effects of reduced MK activity on the mevalonate pathway. Since shortage of isoprenoids has been described in MKD, we checked this observation using a physiologic approach: while normally growing on glucose, erg12-d showed growth deficiency in glycerol, a respirable carbon source, that was not rescued by supplementation with non-sterol isoprenoids, such as farnesol, geraniol nor geranylgeraniol, produced by the mevalonate pathway. Erg12-d whole genome expression analysis revealed specific downregulation of RSF2 gene encoding general transcription factor for respiratory genes, explaining the absence of growth on glycerol. Moreover, we observed the upregulation of genes involved in sulphur amino acids biosynthesis that coincided with the increasing in the amount of proteins containing sulfhydryl groups; upregulation of ubiquinone biosynthesis genes was also detected. Our findings demonstrated that the shortage of isoprenoids is not the main mechanism involved in the respiratory deficit and mitochondrial malfunctioning of MK-defective cells, while the scarcity of ubiquinone plays an important role, as already observed in MKD patients.

Indexed as

Gene Expression Regulation, FungalGenome, FungalHumansMevalonate Kinase DeficiencyMutationPhosphotransferases (Alcohol Group Acceptor)RespirationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTerpenesTranscription FactorsUbiquinonemevalonate kinasePhosphotransferases (Alcohol Group Acceptor)RSF2 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTerpenesTranscription FactorsUbiquinoneGene expressionIsoprenoidsMicroarrayRespiratory metabolismYeast

Identifiers

PMID29374778
OpenAlexW2792346880

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.