Evidence map›Paper›PMID 29374152›Full record

ArticleNature communications2018

Distinct epigenetic programs regulate cardiac myocyte development and disease in the human heart in vivo.

Ralf Gilsbach, Martin Schwaderer, Sebastian Preissl, Björn A Grüning, David Kranzhöfer, Pedro Schneider, Thomas G Nührenberg, Sonia Mulero-Navarro, Dieter Weichenhan, Christian Braun and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
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  4. Article
  5. Cardiac epigenome in heart development and disease.Nature reviews. Cardiology · 2026
    Review
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  19. A simple approach of nuclei isolation for single nucleus multiome sequencing.Journal of molecular and cellular cardiology · 2025
    Article
  20. Article

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Ralf GilsbachInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany.ORCID http://orcid.org/0000-0002-0895-1535
Martin SchwadererInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany.
Sebastian PreisslInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany.
Björn A GrüningBioinformatics Group, Department of Computer Science, University of Freiburg, 79110, Freiburg, Germany.
David KranzhöferInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany.
Pedro SchneiderInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany.
Thomas G NührenbergInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany.
Sonia Mulero-NavarroThe Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029-6542, USA.
Dieter WeichenhanEpigenomics and Cancer Risk Factors, German Cancer Research Center (DKFZ), 69120, Heidelberg, Germany.
Christian BraunForensic Institute, Ludwig-Maximilians-University, 80046, Munich, Germany.
Martina DreßenDepartment of Cardiovascular Surgery, German Heart Center, Technische Universität München, 80636, Munich, Germany.
Adam R JacobsDepartment of Obstetrics, Gynecology and Reproductive Science, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Harald LahmDepartment of Cardiovascular Surgery, German Heart Center, Technische Universität München, 80636, Munich, Germany.
Torsten DoenstDepartment of Cardiothoracic Surgery, Jena University Hospital, Friedrich-Schiller-University, 07740, Jena, Germany.
Rolf BackofenBioinformatics Group, Department of Computer Science, University of Freiburg, 79110, Freiburg, Germany.ORCID http://orcid.org/0000-0001-8231-3323
Markus KraneDepartment of Cardiovascular Surgery, German Heart Center, Technische Universität München, 80636, Munich, Germany.
Bruce D GelbThe Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029-6542, USA.ORCID http://orcid.org/0000-0001-8527-5027
Lutz HeinInstitute of Experimental and Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Freiburg, 79104, Freiburg, Germany. lutz.hein@pharmakol.uni-freiburg.de.

Funding

Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9M
NIH HHS S10 OD018522
6 · The paper itself

Abstract

Epigenetic mechanisms and transcription factor networks essential for differentiation of cardiac myocytes have been uncovered. However, reshaping of the epigenome of these terminally differentiated cells during fetal development, postnatal maturation, and in disease remains unknown. Here, we investigate the dynamics of the cardiac myocyte epigenome during development and in chronic heart failure. We find that prenatal development and postnatal maturation are characterized by a cooperation of active CpG methylation and histone marks at cis-regulatory and genic regions to shape the cardiac myocyte transcriptome. In contrast, pathological gene expression in terminal heart failure is accompanied by changes in active histone marks without major alterations in CpG methylation and repressive chromatin marks. Notably, cis-regulatory regions in cardiac myocytes are significantly enriched for cardiovascular disease-associated variants. This study uncovers distinct layers of epigenetic regulation not only during prenatal development and postnatal maturation but also in diseased human cardiac myocytes.

Indexed as

Cardiovascular DiseasesCell DifferentiationChromatinCpG IslandsDNA MethylationEpigenesis, GeneticHeart FailureHumansMyocytes, CardiacChromatin

Identifiers

PMID29374152
PMCPMC5786002

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.