ArticleMolecular genetics and genomics : MGG2018
Genomic diversity and population structure of three autochthonous Greek sheep breeds assessed with genome-wide DNA arrays.
Article in Molecular genetics and genomics : MGG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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17 citing papers in PubMed.
- Unravelling the genetic structure and genetic relationships of indigenous Greek sheep breeds using SNP markers.Genetics, selection, evolution : GSE · 2026Article
- Genomic insights into Greek sheep structure and admixture with global domestic breeds.BMC genomics · 2026Article
- Artificial and natural selection components reveal the mechanisms of tropical sheep populations against gastrointestinal parasites.PloS one · 2026Article
- Assessing Milk Authenticity Using Protein and Peptide Biomarkers: A Decade of Progress in Species Differentiation and Fraud Detection.Foods (Basel, Switzerland) · 2025Review
- Genetic Diversity, Population Structure, and Historical Gene Flow Patterns of Nine Indigenous Greek Sheep Breeds.Biology · 2025Article
- Genome-Wide Association Study (GWAS) on Reproductive Seasonality in Indigenous Greek Sheep Breeds: Insights into Genetic Integrity.Current issues in molecular biology · 2025Article
- Exploring the Effects of Robertsonian Translocation 1/29 (Rob (1;29)) on Genetic Diversity in Minor Breeds of Spanish Berrenda Cattle via Genome-Wide Analysis.Animals : an open access journal from MDPI · 2024Article
- Genetic Differentiation among Livestock Breeds-Values for FAnimals : an open access journal from MDPI · 2022Article
- Origin, demographics, inbreeding, phylogenetics, and phenogenetics of Karamaniko breed, a major common ancestor of the autochthonous Greek sheep.Tropical animal health and production · 2022Article
- Morphological diversity of northeastern fat-tailed and northwestern thin-tailed indigenous sheep breeds of Ethiopia.Heliyon · 2021Article
- FoodOmicsGR_RI. A Consortium for Comprehensive Molecular Characterisation of Food Products.Metabolites · 2021Review
- Clustering patterns mirror the geographical distribution and genetic history of Lemnos and Lesvos sheep populations.PloS one · 2021Article
- Comparative Transcriptome Analysis of Milk Somatic Cells During Lactation Between Two Intensively Reared Dairy Sheep Breeds.Frontiers in genetics · 2021Article
- On the origin of European sheep as revealed by the diversity of the Balkan breeds and by optimizing population-genetic analysis tools.Genetics, selection, evolution : GSE · 2020Article
- Genetic structure and admixture in sheep from terminal breeds in the United States.Animal genetics · 2020Article
- How to study runs of homozygosity using PLINK? A guide for analyzing medium density SNP data in livestock and pet species.BMC genomics · 2020Article
- Linkage disequilibrium in Brazilian Santa Inês breed, Ovis aries.Scientific reports · 2018Article
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9 authors.
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Abstract
In the present study, genome-wide genotyping was applied to characterize the genetic diversity and population structure of three autochthonous Greek breeds: Boutsko, Karagouniko and Chios. Dairy sheep are among the most significant livestock species in Greece numbering approximately 9 million animals which are characterized by large phenotypic variation and reared under various farming systems. A total of 96 animals were genotyped with the Illumina's OvineSNP50K microarray beadchip, to study the population structure of the breeds and develop a specialized panel of single-nucleotide polymorphisms (SNPs), which could distinguish one breed from the others. Quality control on the dataset resulted in 46,125 SNPs, which were used to evaluate the genetic structure of the breeds. Population structure was assessed through principal component analysis (PCA) and admixture analysis, whereas inbreeding was estimated based on runs of homozygosity (ROHs) coefficients, genomic relationship matrix inbreeding coefficients (F
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