Evidence map›Paper›PMID 29371782›Full record

ArticleElectroanalysis2017

A Single Electrochemical Probe Used for Analysis of Multiple Nucleic Acid Sequences.

Dawn M Mills, Percy Calvo-Marzal, Jeffer M Pinzon, Stephanie Armas, Dmitry M Kolpashchikov, Karin Y Chumbimuni-Torres

Abstract read
In one paragraph

Article in Electroanalysis, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dawn M MillsDepartment of Chemistry, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, United States.
Percy Calvo-MarzalDepartment of Chemistry, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, United States.
Jeffer M PinzonDepartment of Chemistry, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, United States.
Stephanie ArmasDepartment of Chemistry, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, United States.
Dmitry M KolpashchikovDepartment of Chemistry, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, United States.
Karin Y Chumbimuni-TorresDepartment of Chemistry, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, United States.

Funding

Deoxyribozyme sensor-based diagnostics for Mycobacterium tuberculosisR15AI103880 · NIAID · UNIVERSITY OF CENTRAL FLORIDA · PI KOLPASHCHIKOV, DMITRY MIKHAYLOVICH · 2013 to 2013
$430k
NIAID NIH HHS R15 AI103880
6 · The paper itself

Abstract

Electrochemical hybridization sensors have been explored extensively for analysis of specific nucleic acids. However, commercialization of the platform is hindered by the need for attachment of separate oligonucleotide probes complementary to a RNA or DNA target to an electrode's surface. Here we demonstrate that a single probe can be used to analyze several nucleic acid targets with high selectivity and low cost. The universal electrochemical four-way junction (4J)-forming (UE4J) sensor consists of a universal DNA stem-loop (USL) probe attached to the electrode's surface and two adaptor strands (m and f) which hybridize to the USL probe and the analyte to form a 4J associate. The m adaptor strand was conjugated with a methylene blue redox marker for signal ON sensing and monitored using square wave voltammetry. We demonstrated that a single sensor can be used for detection of several different DNA/RNA sequences and can be regenerated in 30 seconds by a simple water rinse. The UE4J sensor enables a high selectivity by recognition of a single base substitution, even at room temperature. The UE4J sensor opens a venue for a re-useable universal platform that can be adopted at low cost for the analysis of DNA or RNA targets.

Indexed as

four-way junctionmethylene bluenucleic acidUniversal probe

Identifiers

PMID29371782
PMCPMC5777621

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.