Evidence map›Paper›PMID 29370774›Full record

ArticleBMC infectious diseases2018

A complex scenario of tuberculosis transmission is revealed through genetic and epidemiological surveys in Porto.

Teresa Rito, Carlos Matos, Carlos Carvalho, Henrique Machado, Gabriela Rodrigues, Olena Oliveira, Eduarda Ferreira, Jorge Gonçalves, Lurdes Maio, Clara Morais and 5 more

Abstract read
In one paragraph

Article in BMC infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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  6. Cervical Lymphadenopathy in a Nonagenarian Woman: What to Think?European journal of case reports in internal medicine · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Teresa RitoLife and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Gualtar Campus, 4710-057, Braga, Portugal. teresarito@med.uminho.pt.ORCID 0000-0002-8374-6347
Carlos MatosEastern Porto Public Health Unit, (ACES Porto Oriental), 4200-510, Porto, Portugal.
Carlos CarvalhoNorthern Health Regional Administration, Department of Public Health, 4000-078, Porto, Portugal.
Henrique MachadoLife and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Gualtar Campus, 4710-057, Braga, Portugal.
Gabriela RodriguesNorthern Health Regional Administration, Department of Public Health, 4000-078, Porto, Portugal.
Olena OliveiraEPI Unit, Institute of Public Health, University of Porto, 4050-600, Porto, Portugal.
Eduarda FerreiraEastern Porto Public Health Unit, (ACES Porto Oriental), 4200-510, Porto, Portugal.
Jorge GonçalvesWestern Porto Public Health Unit, (ACES Porto Ocidental), 4100-503, Porto, Portugal.
Lurdes MaioEastern Porto Public Health Unit, (ACES Porto Oriental), 4200-510, Porto, Portugal.
Clara MoraisPorto TB Outpatient Centre, Centro Diagnóstico pneumológico, 4250-162, Porto, Portugal.
Helena RamosPorto Hospital Centre, Hospital Santo António, 4099-001, Porto, Portugal.
João Tiago GuimarãesEPI Unit, Institute of Public Health, University of Porto, 4050-600, Porto, Portugal.
Catarina L SantosLife and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Gualtar Campus, 4710-057, Braga, Portugal.
Raquel DuarteEPI Unit, Institute of Public Health, University of Porto, 4050-600, Porto, Portugal.
Margarida Correia-NevesLife and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Gualtar Campus, 4710-057, Braga, Portugal.

Funding

EEA Grants 000138DT1Fundação para a Ciência e a Tecnologia SFRH/BPD/108126/2015
6 · The paper itself

Abstract

backgroundTuberculosis (TB) incidence is decreasing worldwide and eradication is becoming plausible. In low-incidence countries, intervention on migrant populations is considered one of the most important strategies for elimination. However, such measures are inappropriate in European areas where TB is largely endemic, such as Porto in Portugal. We aim to understand transmission chains in Porto through a genetic characterization of Mycobacterium tuberculosis strains and through a detailed epidemiological evaluation of cases.

methodsWe genotyped the M. tuberculosis strains using the MIRU-VNTR system. We performed an evolutionary reconstruction of the genotypes with median networks, used in this context for the first time. TB cases from a period of two years were evaluated combining genetic, epidemiological and georeferencing information.

resultsThe data reveal a unique complex scenario in Porto where the autochthonous population acts as a genetic reservoir of M. tuberculosis diversity with discreet episodes of transmission, mostly undetected using classical epidemiology alone.

conclusionsAlthough control policies have been successful in decreasing incidence in Porto, the discerned complexity suggests that, for elimination to be a realistic goal, strategies need to be adjusted and coupled with a continuous genetic characterization of strains and detailed epidemiological evaluation, in order to successfully identify and interrupt transmission chains.

Indexed as

FemaleGenotypeHumansMinisatellite RepeatsMolecular EpidemiologyMycobacterium tuberculosisPortugalSocioeconomic FactorsTuberculosisEpidemiology of tuberculosisGenotyping techniquesMycobacterium tuberculosisPhylogenetic analysisPublic health

Identifiers

PMID29370774
PMCPMC5785791

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.