Evidence map›Paper›PMID 29370293›Full record

ArticlePloS one2018

Gene expression of the two developmentally regulated dermatan sulfate epimerases in the Xenopus embryo.

Nadège Gouignard, Tanja Schön, Christian Holmgren, Ina Strate, Emirhan Taşöz, Franziska Wetzel, Marco Maccarana, Edgar M Pera

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Nadège GouignardDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.
Tanja SchönDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.
Christian HolmgrenDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.
Ina StrateDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.
Emirhan TaşözDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.
Franziska WetzelDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.
Marco MaccaranaDepartment of Experimental Medical Science, Lund University, Lund, Sweden.
Edgar M PeraDepartment of Laboratory Medicine, Lund Stem Cell Center, Lund University, Lund, Sweden.ORCID 0000-0002-0625-0006
Lund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chondroitin sulfate (CS)/dermatan sulfate (DS) proteoglycans are abundant on the cell surface and in the extracellular matrix and have important functions in matrix structure, cell-matrix interaction and signaling. The DS epimerases 1 and 2, encoded by Dse and Dsel, respectively, convert CS to a CS/DS hybrid chain, which is structurally and conformationally richer than CS, favouring interaction with matrix proteins and growth factors. We recently showed that Xenopus Dse is essential for the migration of neural crest cells by allowing cell surface CS/DS proteoglycans to adhere to fibronectin. Here we investigate the expression of Dse and Dsel in Xenopus embryos. We show that both genes are maternally expressed and exhibit partially overlapping activity in the eyes, brain, trigeminal ganglia, neural crest, adenohypophysis, sclerotome, and dorsal endoderm. Dse is specifically expressed in the epidermis, anterior surface ectoderm, spinal nerves, notochord and dermatome, whereas Dsel mRNA alone is transcribed in the spinal cord, epibranchial ganglia, prechordal mesendoderm and myotome. The expression of the two genes coincides with sites of cell differentiation in the epidermis and neural tissue. Several expression domains can be linked to previously reported phenotypes of knockout mice and clinical manifestations, such as the Musculocontractural Ehlers-Danlos syndrome and psychiatric disorders.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBrainCarbohydrate EpimerasesIn Situ HybridizationRNA, MessengerRNA ProbesXenopus laevisCarbohydrate EpimerasesRNA, MessengerRNA Probes

Identifiers

PMID29370293
PMCPMC5784981
OpenAlexW2785852420

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.