Evidence map›Paper›PMID 29369001›Full record

ArticleAutophagy2018

iTRAQ-based proteomics analysis of autophagy-mediated immune responses against the vascular fungal pathogen Verticillium dahliae in Arabidopsis.

Fu-Xin Wang, Yuan-Ming Luo, Zi-Qin Ye, Xue Cao, Jing-Nan Liang, Qian Wang, Yao Wu, Jia-He Wu, Hai-Yun Wang, Min Zhang and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  11. Review
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  14. iTRAQ-Based Proteomics Analysis of Response toInternational journal of molecular sciences · 2021
    Article
  15. Article
  16. Review
  17. Transcriptome Analysis and RNA Interference RevealFrontiers in plant science · 2021
    Article
  18. CRISPR/Cas9 Directed Mutagenesis ofInternational journal of molecular sciences · 2020
    Article
  19. Article
  20. Knockout ofGenes · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Fu-Xin Wanga Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Yuan-Ming Luoa Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Zi-Qin Yed College of Life Sciences , Capital Normal University , Beijing , China.
Xue Caod College of Life Sciences , Capital Normal University , Beijing , China.
Jing-Nan Lianga Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Qian Wanga Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Yao Wua Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Jia-He Wua Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Hai-Yun Wanga Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Min Zhanga Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Huan-Qing Chenga Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
Gui-Xian Xiaa Institute of Microbiology , Chinese Academy of Sciences , Beijing , China.
State Key Laboratory of Plant Genomics · CNChinese Academy of Sciences · CNInstitute of Microbiology · CNCapital Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mechanisms underlying the functional link between autophagy and plant innate immunity remain largely unknown. In this study, we investigated the autophagy-mediated plant defense responses against Verticillium dahliae (V. dahliae) infection by comparative proteomics and cellular analyses. An assessment of the autophagy activity and disease development showed that autophagic processes were tightly related to the tolerance of Arabidopsis plant to Verticillium wilt. An isobaric tags for relative and absolute quantification (iTRAQ)-based proteomics analysis was performed, and we identified a total of 780 differentially accumulated proteins (DAPs) between wild-type and mutant atg10-1 Arabidopsis plants upon V. dahliae infection, of which, 193 ATG8-family-interacting proteins were identified in silico and their associations with autophagy were verified for several selected proteins. Three important aspects of autophagy-mediated defense against V. dahliae infection were revealed: 1) autophagy is required for the activation of upstream defense responses; 2) autophagy-mediated mitochondrial degradation (mitophagy) occurs and is an important player in the defense process; and 3) autophagy promotes the transdifferentiation of perivascular cells and the formation of xylem hyperplasia, which are crucial for protection against this vascular disease. Together, our results provide several novel insights for understanding the functional association between autophagy and plant immune responses.

Indexed as

ArabidopsisAutophagyGene Expression Regulation, PlantPlant DiseasesPlant ProteinsProteomicsVerticilliumPlant ProteinsautophagyiTRAQmitophagyplant immunityproteomicsVerticillium dahliae

Identifiers

PMID29369001
PMCPMC5959329
OpenAlexW2792939628

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.