Evidence map›Paper›PMID 29367695›Full record

ArticleScientific reports2018

High diversity and abundance of cultivable tetracycline-resistant bacteria in soil following pig manure application.

Yijun Kang, Qing Li, Zhifeng Yin, Min Shen, Haitao Zhao, Yanchao Bai, Lijuan Mei, Jian Hu

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  3. Review
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  5. Article
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  7. Article
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  10. Review
  11. Non-Penicillin-SusceptiblePathogens (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yijun KangEnvironmental Science & Engineering, Yangzhou University, Yangzhou, Jiangsu, P. R. China. yjkang@yctu.edu.cn.
Qing LiEnvironmental Science & Engineering, Yangzhou University, Yangzhou, Jiangsu, P. R. China.
Zhifeng YinCollege of Marine and Bio-engineering, Yancheng Teachers University, Yancheng, Jiangsu, P. R. China.
Min ShenCollege of Marine and Bio-engineering, Yancheng Teachers University, Yancheng, Jiangsu, P. R. China.
Haitao ZhaoEnvironmental Science & Engineering, Yangzhou University, Yangzhou, Jiangsu, P. R. China.
Yanchao BaiEnvironmental Science & Engineering, Yangzhou University, Yangzhou, Jiangsu, P. R. China.
Lijuan MeiEnvironmental Science & Engineering, Yangzhou University, Yangzhou, Jiangsu, P. R. China.
Jian HuEnvironmental Science & Engineering, Yangzhou University, Yangzhou, Jiangsu, P. R. China. huj@yzu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

By performing a microcosm experiment mimicking fertilization, we assessed the dynamic distribution of tetracycline-resistant bacteria (TRB) and corresponding tetracycline resistance genes (TRGs) from pig manure (PM) to the fertilized soil, by culture-dependent methods and PCR detection. Cultivable TRB were most abundant in PM, followed by fertilized soil and unfertilized soil. By restriction fragment length polymorphism (RFLP) analysis, TRB were assigned to 29, 20, and 153 operational taxonomic units (OTUs) in PM, unfertilized soil, and fertilized soil, respectively. After identification, they were further grouped into 19, 12, and 62 species, showing an enhanced diversity of cultivable TRB in the soil following PM application. The proportions of potentially pathogenic TRB in fertilized soil decreased by 69.35% and 41.92% compared with PM and unfertilized soil. Bacillus cereus was likely widely distributed TRB under various environments, and Rhodococcus erythropolis and Acinetobacter sp. probably spread from PM to the soil via fertilization. Meanwhile, tetL was the most common efflux pump gene in both unfertilized and fertilized soils relative to PM; tetB(P) and tet36 were common in PM, whereas tetO was predominant in unfertilized and fertilized soil samples. Sequencing indicated that over 65% of randomly selected TRB in fertilized soil with acquired resistance derived from PM.

Indexed as

Genes, BacterialSoil MicrobiologyAgricultureAnimalsAnti-Bacterial AgentsBacteriaFertilizersManureSoilSwineTetracyclineTetracycline ResistanceAnti-Bacterial AgentsFertilizersManureSoilTetracycline

Identifiers

PMID29367695
PMCPMC5784163

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.