ArticleScientific reports2018
Genome-wide association mapping and genomic prediction for CBSD resistance in Manihot esculenta.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.
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43 citing papers in PubMed, 87 citations in OpenAlex.
- Pinpointing genomic regions conferring herbicide tolerance in cassava via genome-wide association mapping.Plant molecular biology · 2026Article
- Genomic prediction accuracy for low hydrogen cyanide selection in fresh cassava roots. Comparative model analysis.BMC plant biology · 2026Article
- Genome-wide association study of resistance to taro leaf blight and yield traits in taro (Colocasia esculenta (L.) Schott).Scientific reports · 2026Article
- Advances and prospects of genomic-assisted breeding in roots, tubers, and banana crops.Frontiers in plant science · 2026Review
- Research neglect of root system architecture in root and tuber crops important for Sub-Saharan African Food Security.PloS one · 2026Article
- Advancements and strategies of genetic improvement in cassava (Horticulture research · 2025Article
- Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America.Scientific reports · 2024Article
- Genome-wide association study for yield and quality of granulated cassava processed product.The plant genome · 2024Article
- Identification of Genomic Regions for Traits Associated with Flowering in Cassava (Plants (Basel, Switzerland) · 2024Article
- Optimizing drought tolerance in cassava through genomic selection.Frontiers in plant science · 2024Article
- Genetic analysis of cassava brown streak disease root necrosis using image analysis and genome-wide association studies.Frontiers in plant science · 2024Article
- Genetic complexity of cassava brown streak disease: insights from qPCR-based viral titer analysis and genome-wide association studies.Frontiers in plant science · 2024Article
- Candidate genes for field resistance to cassava brown streak disease revealed through the analysis of multiple data sources.Frontiers in plant science · 2023Article
- Advances in Genetic Analysis and Breeding of Cassava (Plants (Basel, Switzerland) · 2022Review
- Current status and impending progress for cassava structural genomics.Plant molecular biology · 2022Review
- Genome-wide association analysis reveals new insights into the genetic architecture of defensive, agro-morphological and quality-related traits in cassava.Plant molecular biology · 2022Article
- The Cassava NBS-LRR Genes Confer Resistance to Cassava Bacterial Blight.Frontiers in plant science · 2022Article
- Genetic dissection of cassava brown streak disease in a genomic selection population.Frontiers in plant science · 2022Article
- Utility of Ugandan genomic selection cassava breeding populations for prediction of cassava viral disease resistance and yield in West African clones.Frontiers in plant science · 2022Article
- Genome-wide association mapping and genomic prediction of yield-related traits and starch pasting properties in cassava.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
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Authors and funding
11 authors at 5 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cassava (Manihot esculenta Crantz) is an important security crop that faces severe yield loses due to cassava brown streak disease (CBSD). Motivated by the slow progress of conventional breeding, genetic improvement of cassava is undergoing rapid change due to the implementation of quantitative trait loci mapping, Genome-wide association mapping (GWAS), and genomic selection (GS). In this study, two breeding panels were genotyped for SNP markers using genotyping by sequencing and phenotyped for foliar and CBSD root symptoms at five locations in Uganda. Our GWAS study found two regions associated to CBSD, one on chromosome 4 which co-localizes with a Manihot glaziovii introgression segment and one on chromosome 11, which contains a cluster of nucleotide-binding site-leucine-rich repeat (NBS-LRR) genes. We evaluated the potential of GS to improve CBSD resistance by assessing the accuracy of seven prediction models. Predictive accuracy values varied between CBSD foliar severity traits at 3 months after planting (MAP) (0.27-0.32), 6 MAP (0.40-0.42) and root severity (0.31-0.42). For all traits, Random Forest and reproducing kernel Hilbert spaces regression showed the highest predictive accuracies. Our results provide an insight into the genetics of CBSD resistance to guide CBSD marker-assisted breeding and highlight the potential of GS to improve cassava breeding.
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