Evidence map›Paper›PMID 29367589›Full record

ArticleNature communications2018

Evolutionary adaptations to new environments generally reverse plastic phenotypic changes.

Wei-Chin Ho, Jianzhi Zhang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
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  9. Systematic design and evaluation of artificial COSynthetic and systems biotechnology · 2025
    Article
  10. Article
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  14. Article
  15. Plastic responses to past environments shape adaptation to novel selection pressures.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Article
  17. Impacts of limits to adaptation on population and community persistence in a changing environment.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  18. Metabolic plasticity and adaptive evolution inFrontiers in plant science · 2025
    Review
  19. Systematic data analysis pipeline for quantitative morphological cell phenotyping.Computational and structural biotechnology journal · 2024
    Review
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Wei-Chin HoDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
Jianzhi ZhangDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, 48109, USA. jianzhi@umich.edu.ORCID http://orcid.org/0000-0001-6141-1290
University of Michigan · US

Funding

Pleiotropy: patterns, mechanisms, and evolutionary consequencesR01GM103232 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHANG, JIANZHI · 2013 to 2020
$1.8M
NIGMS NIH HHS R01 GM103232
6 · The paper itself

Abstract

Organismal adaptation to a new environment may start with plastic phenotypic changes followed by genetic changes, but whether the plastic changes are stepping stones to genetic adaptation is debated. Here we address this question by investigating gene expression and metabolic flux changes in the two-phase adaptation process using transcriptomic data from multiple experimental evolution studies and computational metabolic network analysis, respectively. We discover that genetic changes more frequently reverse than reinforce plastic phenotypic changes in virtually every adaptation. Metabolic network analysis reveals that, even in the presence of plasticity, organismal fitness drops after environmental shifts, but largely recovers through subsequent evolution. Such fitness trajectories explain why plastic phenotypic changes are genetically compensated rather than strengthened. In conclusion, although phenotypic plasticity may serve as an emergency response to a new environment that is necessary for survival, it does not generally facilitate genetic adaptation by bringing the organismal phenotype closer to the new optimum.

Indexed as

Adaptation, BiologicalEnvironmentAnimalsEscherichia coliGene Expression ProfilingMetabolic Networks and PathwaysPhenotypePoeciliaTranscriptomeYeasts

Identifiers

PMID29367589
PMCPMC5783951
OpenAlexW2807422051

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.