Evidence map›Paper›PMID 29367453›Full record

ReviewRNA (New York, N.Y.)2018

The life of U6 small nuclear RNA, from cradle to grave.

Allison L Didychuk, Samuel E Butcher, David A Brow

Open access · bronzeAbstract readReview
In one paragraph

Review in RNA (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 126 citations in OpenAlex.

  1. Article
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  8. Review
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Allison L DidychukDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.ORCID 0000-0001-7277-5233
Samuel E ButcherDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.
David A BrowDepartment of Biomolecular Chemistry, School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin 53706, USA.ORCID 0000-0002-8028-014X
University of Wisconsin–Madison · US

Funding

Biophysical investigations of RNA complexes essential for gene expressionR35GM118131 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Samuel E Butcher · 2016 to 2026
$5.1M
RNA-based mechanisms in nuclear steps of gene expressionR35GM118075 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BROW, DAVID A · 2016 to 2025
$3.1M
NIGMS NIH HHS R35 GM118075NIGMS NIH HHS R35 GM118131
6 · The paper itself

Abstract

Removal of introns from precursor messenger RNA (pre-mRNA) and some noncoding transcripts is an essential step in eukaryotic gene expression. In the nucleus, this process of RNA splicing is carried out by the spliceosome, a multi-megaDalton macromolecular machine whose core components are conserved from yeast to humans. In addition to many proteins, the spliceosome contains five uridine-rich small nuclear RNAs (snRNAs) that undergo an elaborate series of conformational changes to correctly recognize the splice sites and catalyze intron removal. Decades of biochemical and genetic data, along with recent cryo-EM structures, unequivocally demonstrate that U6 snRNA forms much of the catalytic core of the spliceosome and is highly dynamic, interacting with three snRNAs, the pre-mRNA substrate, and >25 protein partners throughout the splicing cycle. This review summarizes the current state of knowledge on how U6 snRNA is synthesized, modified, incorporated into snRNPs and spliceosomes, recycled, and degraded.

Indexed as

HumansNucleic Acid ConformationRNA, MessengerRNA Polymerase IIIRNA Processing, Post-TranscriptionalRNA, Small NuclearRNA Splice SitesRNA SplicingSaccharomyces cerevisiaeSpliceosomesRNA, MessengerRNA Polymerase IIIRNA, Small NuclearRNA Splice SitesU6 small nuclear RNAspliceosomeU6 gene transcriptionU6 snRNAU6 snRNP

Identifiers

PMID29367453
PMCPMC5855946
OpenAlexW2790140187

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.