Evidence map›Paper›PMID 29363864›Full record

ArticleJournal of cellular and molecular medicine2018

SRR intronic variation inhibits expression of its neighbouring SMG6 gene and protects against temporal lobe epilepsy.

Hua Tao, Xu Zhou, Qian Xie, Zhonghua Ma, Fuhai Sun, Lili Cui, Yujie Cai, Guoda Ma, Jiawu Fu, Zhou Liu and 11 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  3. Journal of Cancer · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 1 country.

Hua TaoDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.ORCID 0000-0002-9506-5987
Xu ZhouClinical Research Center, Guangdong Medical University, Zhanjiang, Guangdong, China.
Qian XieEmergency Department, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Zhonghua MaDepartment of Neurology, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Fuhai SunDepartment of Neurology, the First People's Hospital of Pingdingshan, Pingdingshan, Hebei, China.
Lili CuiGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
Yujie CaiGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
Guoda MaGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
Jiawu FuDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Zhou LiuGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
You LiGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
Haihong ZhouDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Jianghao ZhaoDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Yanyan ChenGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
Hui MaiDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Ying ChenDepartment of Neurology, Central People's Hospital of Zhanjiang, Zhanjiang, Guangdong, China.
Jun ChenDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Wei QiDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Chaowen SunDepartment of Neurology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Bin ZhaoGuangdong Key Laboratory of Age-related Cardiac and Cerebral Diseases, Guangdong Medical University, Zhanjiang, Guangdong, China.
Keshen LiInstitute of Neurology, Guangdong Medical University, Zhanjiang, Guangdong, China.
Guangdong Medical College · CNBeijing Tongren Hospital · CNPingdingshan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

D-serine is a predominant N-methyl-D-aspartate receptor co-agonist with glutamate, and excessive activation of the receptor plays a substantial role in epileptic seizures. Serine racemase (SRR) is responsible for transforming L-serine to D-serine. In this study, we aimed to investigate the genetic roles of SRR and a neighbouring gene, nonsense-mediated mRNA decay factor (SMG6), in temporal lobe epilepsy (TLE). Here, a total of 496 TLE patients and 528 healthy individuals were successfully genotyped for three SRR tag single nucleotide polymorphisms. The frequencies of the GG genotype at rs4523957 T > G were reduced in the TLE cases in the initial cohort (cohort 1) and were confirmed in the independent cohort (cohort 2). An analysis of all TLE cases in cohort 1 + 2 revealed that the seizure frequency and drug-resistant incidence were significantly decreased in carriers of the GG genotype at rs4523957. Intriguingly, the activity of the SMG6 promoter with the mutant allele at rs4523957 decreased by 22% in the dual-luciferase assay, and up-regulated expression of SMG6 was observed in an epilepsy rat model. This study provides the first demonstration that the GG genotype is a protective marker against TLE. In particular, variation at rs4523957 likely inhibits SMG6 transcription and plays a key role against susceptibility to and severity of TLE. The significance of SMG6 hyperfunction in epileptic seizures deserves to be investigated in future studies.

Indexed as

Polymorphism, Single NucleotideAnimalsCase-Control StudiesCohort StudiesComputational BiologyDisease Models, AnimalEndoribonucleasesEpilepsy, Temporal LobeFemaleGene Expression RegulationGenes, ReporterGenotypeGlutamic AcidHippocampusHumansIntronsEndoribonucleasesGlutamic AcidLuciferasesRacemases and EpimerasesReceptors, N-Methyl-D-AspartateSerineSerine RacemaseSMG6 protein, humanTelomeraseN-methyl-D-aspartate receptorserine racemaseSMG6temporal lobe epilepsy

Identifiers

PMID29363864
PMCPMC5824374
OpenAlexW2791692636

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.