Evidence map›Paper›PMID 29363288›Full record

ArticleTransboundary and emerging diseases2018

Isolation and phylogenetic analysis of porcine deltacoronavirus from pigs with diarrhoea in Hebei province, China.

B-J Liu, Y-Z Zuo, W-Y Gu, S-X Luo, Q-K Shi, L-S Hou, F Zhong, J-H Fan

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  14. Detection and spike gene characterization in porcine deltacoronavirus in China during 2016-2018.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

B-J LiuCollege of Veterinary Medicine, Agricultural University of Hebei, Baoding, China.
Y-Z ZuoCollege of Veterinary Medicine, Agricultural University of Hebei, Baoding, China.
W-Y GuAnimal Diseases Control Center of Hebei, Shijiazhuang, China.
S-X LuoCollege of Veterinary Medicine, Agricultural University of Hebei, Baoding, China.
Q-K ShiCollege of Veterinary Medicine, Agricultural University of Hebei, Baoding, China.
L-S HouCollege of Veterinary Medicine, Agricultural University of Hebei, Baoding, China.
F ZhongCollege of Animal Science and Technology, Agricultural University of Hebei, Baoding, China.
J-H FanCollege of Veterinary Medicine, Agricultural University of Hebei, Baoding, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine deltacoronavirus (PDCoV) is a recently identified coronavirus in the genus Deltacoronavirus that can cause enteric disease with clinical signs including diarrhoea, vomiting, dehydration and mortality in neonatal piglets. Although evidence of the prevalence of PDCoV in China is accumulating, little published information about Chinese PDCoV isolates is available. In this study, we investigated the presence of PDCoV in 49 faecal/intestinal samples from piglets with diarrhoea on different farms in Hebei province. Five samples (10.2%) were positive for PDCoV, but no coinfection of PDCoV with other enteropathogens was observed. A PDCoV strain named HB-BD was successfully isolated from the intestinal contents of a diarrhoeic piglet and serially propagated in swine testicular (ST) cells for >40 passages. The complete genome of the HB-BD strain was sequenced and analysed. Genomic analysis showed that the HB-BD strain had a closer relationship with Chinese strains than those from other countries and was grouped within the Chinese PDCoV cluster. The results of this study will be valuable for further research of PDCoV genetic evolution and development of effective diagnostic reagents, assays and potential vaccines against newly emerged PDCoV strains.

Indexed as

AnimalsChinaCoronavirusCoronavirus InfectionsDiarrheaEvolution, MolecularFecesGenes, ViralGenomicsIntestinesPhylogenySwineSwine DiseasesHebei provinceisolationphylogenetic analysisporcine deltacoronavirus

Identifiers

PMID29363288
PMCPMC7169788

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.