Evidence map›Paper›PMID 29362971›Full record

ArticleJournal of industrial microbiology & biotechnology2018

Engineering co-culture system for production of apigetrin in Escherichia coli.

Nguyen Huy Thuan, Amit Kumar Chaudhary, Duong Van Cuong, Nguyen Xuan Cuong

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Review
  3. Biosynthesis of Apigenin Glucosides in EngineeredJournal of microbiology and biotechnology · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Bioproduction of eriodictyol by Escherichia coli engineered co-culture.World journal of microbiology & biotechnology · 2022
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Two-species community design of lactic acid bacteria for optimal production of lactate.Computational and structural biotechnology journal · 2021
    Article
  17. Metabolic Engineering of Microorganisms for the Production of Flavonoids.Frontiers in bioengineering and biotechnology · 2020
    Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

Nguyen Huy ThuanCenter for Molecular Biology, Duy Tan University, 03 Quang Trung Street, Haichau District, Danang, Vietnam. nguyenhuythuan@dtu.edu.vn.ORCID http://orcid.org/0000-0001-8891-7195
Amit Kumar ChaudharyDepartment of Pharmaceutical Sciences, University of Nebraska Medical Center, Omaha, NE, 68198, USA.
Duong Van CuongFaculty of Biotechnology and Food Technology, Thainguyen University of Agriculture and Forestry, Thainguyen, Vietnam.
Nguyen Xuan CuongLab of Marine Medicinal Materials, Institute of Marine Biochemistry (IMBC), Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Hanoi, Vietnam.
Duy Tan University · VNThai Nguyen University of Agriculture and Forestry · VNUniversity of Nebraska Medical Center · USVietnam Academy of Science and Technology · VN

Funding

National Foundation for Science and Technology Development of Vietnam (NAFOSTED) 106-NN.02-2014.25
6 · The paper itself

Abstract

Microbial cells have extensively been utilized to produce value-added bioactive compounds. Based on advancement in protein engineering, DNA recombinant technology, genome engineering, and metabolic remodeling, the microbes can be re-engineered to produce industrially and medicinally important platform chemicals. The emergence of co-culture system which reduces the metabolic burden and allows parallel optimization of the engineered pathway in a modular fashion restricting the formation of undesired byproducts has become an alternative way to synthesize and produce bioactive compounds. In this study, we present genetically engineered E. coli-based co-culture system to the de novo synthesis of apigetrin (APG), an apigenin-7-O-β-D-glucopyranoside of apigenin. The culture system consists of an upstream module including 4-coumarate: CoA ligase (4CL), chalcone synthase, chalcone flavanone isomerase (CHS, CHI), and flavone synthase I (FNSI) to synthesize apigenin (API) from p-coumaric acid (PCA). Whereas, the downstream system contains a metabolizing module to enhance the production of UDP-glucose and expression of glycosyltransferase (PaGT3) to convert API into APG. To accomplish this improvement in titer, the initial inoculum ratio of strains for making the co-culture system, temperature, and media component was optimized. Following large-scale production, a yield of 38.5 µM (16.6 mg/L) of APG was achieved. In overall, this study provided an efficient tool to synthesize bioactive compounds in microbial cells.

Indexed as

Coculture TechniquesIndustrial MicrobiologyMetabolic EngineeringAcyltransferasesApigeninChemistry, PharmaceuticalChromatography, High Pressure LiquidCoenzyme A LigasesCoumaric AcidsDNA, RecombinantEscherichia coliIsomerasesMixed Function OxygenasesPlasmidsPropionatesSpectrometry, Mass, Electrospray IonizationAcyltransferasesApigeninapigetrinCoenzyme A LigasesCoumaric AcidsDNA, Recombinantflavanone synthetaseflavone synthase IIsomerasesMixed Function Oxygenasesp-coumaric acidPropionatesApigetrinCo-cultureE. coliFermentationRecombinant

Identifiers

PMID29362971
OpenAlexW2793327452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.