Evidence map›Paper›PMID 29362489›Full record

ArticleEuropean journal of human genetics : EJHG2018

Genetic variant in CACNA1C is associated with PTSD in traumatized police officers.

Izabela M Krzyzewska, Judith B M Ensink, Laura Nawijn, Adri N Mul, Saskia B Koch, Andrea Venema, Vinod Shankar, Jessie L Frijling, Dirk J Veltman, Ramon J L Lindauer and 4 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Izabela M KrzyzewskaDepartment of Clinical Genetics, Genome Diagnostics laboratory, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Judith B M EnsinkDepartment of Child and Adolescent Psychiatry, Academic Medical Center, Amsterdam, The Netherlands.
Laura NawijnDepartment of Psychiatry, Anxiety Disorders, Academic Medical Center, Amsterdam, The Netherlands.
Adri N MulDepartment of Clinical Genetics, Genome Diagnostics laboratory, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0003-1189-4700
Saskia B KochDepartment of Psychiatry, Anxiety Disorders, Academic Medical Center, Amsterdam, The Netherlands.
Andrea VenemaDepartment of Clinical Genetics, Genome Diagnostics laboratory, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Vinod ShankarDepartment of Clinical Genetics, Genome Diagnostics laboratory, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Jessie L FrijlingDepartment of Psychiatry, Anxiety Disorders, Academic Medical Center, Amsterdam, The Netherlands.
Dirk J VeltmanDepartment of Psychiatry, VU University Medical Center, Amsterdam, The Netherlands.
Ramon J L LindauerDepartment of Child and Adolescent Psychiatry, Academic Medical Center, Amsterdam, The Netherlands.
Miranda OlffDepartment of Psychiatry, Anxiety Disorders, Academic Medical Center, Amsterdam, The Netherlands.
Marcel M A M MannensDepartment of Clinical Genetics, Genome Diagnostics laboratory, Academic Medical Center Amsterdam, Amsterdam, The Netherlands. m.a.mannens@amc.uva.nl.
Mirjam van ZuidenDepartment of Psychiatry, Anxiety Disorders, Academic Medical Center, Amsterdam, The Netherlands.
Peter HennemanDepartment of Clinical Genetics, Genome Diagnostics laboratory, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Amsterdam UMC Location University of Amsterdam · NLAmsterdam UMC Location Vrije Universiteit Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Posttraumatic stress disorder (PTSD) is a debilitating psychiatric disorder that may develop after a traumatic event. Here we aimed to identify epigenetic and genetic loci associated with PTSD. We included 73 traumatized police officers with extreme phenotypes regarding symptom severity despite similar trauma history: n = 34 had PTSD and n = 39 had minimal PTSD symptoms. Epigenetic and genetic profiles were based on the Illumina HumanMethylation450 BeadChip. We searched for differentially methylated probes (DMPs) and differentially methylated regions (DMRs). For genetic associations we analyzed the CpG-SNPs present on the array. We detected no genome-wide significant DMPs and we did not replicate previously reported DMPs associated with PTSD. However, GSE analysis of the top 100 DMPs showed enrichment of three genes involved in the dopaminergic neurogenesis pathway. Furthermore, we observed a suggestive association of one relatively large DMR between patients and controls, which was located at the PAX8 gene and previously associated with other psychiatric disorders. Finally, we validated five PTSD-associated CpG-SNPs identified with the array using sanger sequencing. We subsequently replicated the association of one common SNP (rs1990322) in the CACNA1C locus with PTSD in an independent cohort of traumatized children. The CACNA1C locus was previously associated with other psychiatric disorders, but not yet with PTSD. Thus, despite the small sample size, inclusion of extreme symptom severity phenotypes in a highly homogenous traumatized cohort enabled detection of epigenetic and genetic loci associated with PTSD. Moreover, here we showed that genetically confounded 450K probes are informative for genetic association analysis.

Indexed as

Polymorphism, Single NucleotideAdultAgedCalcium Channels, L-TypeCase-Control StudiesCpG IslandsDNA MethylationFemaleHumansMaleMiddle AgedPoliceStress Disorders, Post-TraumaticCACNA1C protein, humanCalcium Channels, L-Type

Identifiers

PMID29362489
PMCPMC5838973
OpenAlexW2792217667

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.