Evidence map›Paper›PMID 29362388›Full record

ArticleScientific reports2018

Drylands soil bacterial community is affected by land use change and different irrigation practices in the Mezquital Valley, Mexico.

Kathia Lüneberg, Dominik Schneider, Christina Siebe, Rolf Daniel

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 86 citations in OpenAlex.

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  5. Endobacteria Have a Negative Effect on the Virulence ofJournal of fungi (Basel, Switzerland) · 2025
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  14. Ecological clusters of soil taxa within bipartite networks are highly sensitive to climatic conditions in global drylands.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  15. Article
  16. Effect Mechanism of Land Consolidation on Soil Bacterial Community: A Case Study in Eastern China.International journal of environmental research and public health · 2022
    Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kathia LünebergDepartamento de Edafología, Instituto de Geología, Universidad Nacional Autónoma de México, Ciudad Universitaria, Mexico City, Mexico. kluneberg@geologia.unam.mx.
Dominik SchneiderGenomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Universität Göttingen, Göttingen, Germany.
Christina SiebeDepartamento de Edafología, Instituto de Geología, Universidad Nacional Autónoma de México, Ciudad Universitaria, Mexico City, Mexico.
Rolf DanielGenomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Universität Göttingen, Göttingen, Germany.ORCID http://orcid.org/0000-0002-8646-7925
Universidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dryland agriculture nourishes one third of global population, although crop irrigation is often mandatory. As freshwater sources are scarce, treated and untreated wastewater is increasingly used for irrigation. Here, we investigated how the transformation of semiarid shrubland into rainfed farming or irrigated agriculture with freshwater, dam-stored or untreated wastewater affects the total (DNA-based) and active (RNA-based) soil bacterial community composition, diversity, and functionality. To do this we collected soil samples during the dry and rainy seasons and isolated DNA and RNA. Soil moisture, sodium content and pH were the strongest drivers of the bacterial community composition. We found lineage-specific adaptations to drought and sodium content in specific land use systems. Predicted functionality profiles revealed gene abundances involved in nitrogen, carbon and phosphorous cycles differed among land use systems and season. Freshwater irrigated bacterial community is taxonomically and functionally susceptible to seasonal environmental changes, while wastewater irrigated ones are taxonomically susceptible but functionally resistant to them. Additionally, we identified potentially harmful human and phytopathogens. The analyses of 16 S rRNA genes, its transcripts and deduced functional profiles provided extensive understanding of the short-term and long-term responses of bacterial communities associated to land use, seasonality, and water quality used for irrigation in drylands.

Indexed as

Soil MicrobiologyAgricultural IrrigationBacteriaCrop ProductionDNA, BacterialFresh WaterMexicoPhylogenyRNA, BacterialSequence Analysis, DNASoilWastewaterWater QualityDNA, BacterialRNA, BacterialSoilWastewater

Identifiers

PMID29362388
PMCPMC5780513
OpenAlexW2806598410

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.