Evidence map›Paper›PMID 29361357›Full record

ArticleOphthalmology2018

Genetic Risk Score Is Associated with Vertical Cup-to-Disc Ratio and Improves Prediction of Primary Open-Angle Glaucoma in Latinos.

Drew R Nannini, Heejin Kim, Fangda Fan, Xiaoyi Gao

Abstract read
In one paragraph

Article in Ophthalmology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
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  8. Genetic Associations Between Smoking- and Glaucoma-Related Traits.Translational vision science & technology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Drew R NanniniDepartment of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, Illinois.
Heejin KimDepartment of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, Illinois.
Fangda FanDepartment of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, Illinois.
Xiaoyi GaoDepartment of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, Illinois. Electronic address: rgao@uic.edu.
University of Illinois Chicago · US

Funding

Translational Core for Therapeutic and Diagnostic DevelopmentP30EY001792 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MCANANY, JAMES JASON · 1985 to 2025
$14.8M
Mexican American Glaucoma Genetic Study (MAGGS)R01EY022651 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GAO, XIAOYI RAYMOND · 2012 to 2016
$4.2M
NEI NIH HHS P30 EY001792NEI NIH HHS R01 EY022651
6 · The paper itself

Abstract

purposeGenome-wide association studies have identified multiple genetic variants associated with vertical cup-to-disc ratio (VCDR). Genetic risk scores (GRS) examine the aggregate genetic effect of individual variants on a trait by combining these separate genetic variants into a single measure. The purpose of this study was to construct GRS for VCDR and to determine whether the GRS are associated with VCDR and whether the GRS increase the discriminatory ability for primary open-angle glaucoma (POAG) in a Latino population.

designPopulation-based genetic association study.

participantsA total of 4018 Latino participants recruited from Los Angeles.

methodsWeighted and unweighted GRS were constructed using 68 previously reported VCDR single nucleotide polymorphisms (SNPs), as well as SNPs from our own genome-wide association data. Linear and logistic regression analyses examined the associations of GRS with VCDR and POAG, respectively. To evaluate the discriminatory ability of the GRS for POAG, we conducted receiver operating characteristic (ROC) analyses.

main outcome measuresThe relationship between GRS and VCDR in Latinos.

resultsThe GRS were associated significantly with VCDR (P < 0.0001), after adjusting for age, gender, central corneal thickness, intraocular pressure, and education. The weighted GRS explained an additional 2.74% of the variation in VCDR. Adding the weighted GRS derived from previously reported SNPs resulted in a moderate improvement in the discriminatory ability for POAG during ROC analyses, yielding an area under the ROC curve (AUC) of 0.735 (95% CI, 0.701-0.768). When our own SNPs were used, the AUC increased significantly to 0.809 (95% CI, 0.781-0.837; P < 0.0001). We obtained similar results for the unweighted GRS.

conclusionsTo our knowledge, we identified a novel association between GRS and VCDR and its improvement in the discriminatory ability of POAG in a Latino population.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAgedCase-Control StudiesFemaleGenetic Association StudiesGenome-Wide Association StudyGenotypeGenotyping TechniquesGlaucoma, Open-AngleHispanic or LatinoHumansLos AngelesMaleMiddle AgedOptic Disk

Identifiers

PMID29361357
PMCPMC5963986
OpenAlexW2783667435

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.