Evidence map›Paper›PMID 29358613›Full record

ArticleEuropean journal of human genetics : EJHG2018

Key apoptotic genes APAF1 and CASP9 implicated in recurrent folate-resistant neural tube defects.

Catherine J Spellicy, Joy Norris, Renee Bend, Caleb Bupp, Paul Mester, Tracy Reynolds, Jane Dean, Yunhui Peng, Emil Alexov, Charles E Schwartz and 2 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Caspases in the Developing Central Nervous System: Apoptosis and Beyond.Frontiers in cell and developmental biology · 2021
    Review
  12. Review
  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Catherine J SpellicyGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Joy NorrisGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Renee BendGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Caleb BuppSpectrum Health, Grand Rapids, MI, USA.
Paul MesterGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Tracy ReynoldsGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Jane DeanGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Yunhui PengClemson University, Clemson, SC, USA.
Emil AlexovClemson University, Clemson, SC, USA.
Charles E SchwartzGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Roger S StevensonGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA.
Michael J FriezGreenwood Genetic Center, 106 Gregor Mendel Circle, Greenwood, SC, 29649, USA. friez@ggc.org.
Greenwood Genetic Center · USClemson University · USSpectrum Health · US

Funding

New Generation DelPhi: large systems and beyond electrostaticsR01GM093937 · NIGMS · CLEMSON UNIVERSITY · PI ALEXOV, EMIL GEORGIEV · 2010 to 2023
$4.3M
NIGMS NIH HHS R01 GM093937
6 · The paper itself

Abstract

Neural tube defects (NTDs) remain one of the most serious birth defects, and although genes in several pathways have been implicated as risk factors for neural tube defects via knockout mouse models, very few molecular causes in humans have been identified. Whole exome sequencing identified deleterious variants in key apoptotic genes in two families with recurrent neural tube defects. Functional studies in fibroblasts indicate that these variants are loss-of-function, as apoptosis is significantly reduced. This is the first report of variants in apoptotic genes contributing to neural tube defect risk in humans.

Indexed as

AdultApoptosisApoptotic Protease-Activating Factor 1Caspase 9Cells, CulturedDrug ResistanceFemaleFetal DeathFibroblastsFolic AcidHumansLoss of Function MutationMaleNeural Tube DefectsPregnancyAPAF1 protein, humanApoptotic Protease-Activating Factor 1CASP9 protein, humanCaspase 9Folic Acid

Identifiers

PMID29358613
PMCPMC5838979
OpenAlexW2790356655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.