Evidence map›Paper›PMID 29358331›Full record

ArticleThe Journal of biological chemistry2018

LSD1 demethylase and the methyl-binding protein PHF20L1 prevent SET7 methyltransferase-dependent proteolysis of the stem-cell protein SOX2.

Chunxiao Zhang, Nam Hoang, Feng Leng, Lovely Saxena, Logan Lee, Salvador Alejo, Dandan Qi, Anthony Khal, Hong Sun, Fei Lu and 1 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

  1. Development of a prognostic prediction model incorporatingJournal of gastrointestinal oncology · 2026
    Article
  2. Article
  3. Review
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  6. Lysine and arginine methylation of transcription factors.Cellular and molecular life sciences : CMLS · 2024
    Review
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  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
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  18. Functional characterization of SOX2 as an anticancer target.Signal transduction and targeted therapy · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Chunxiao ZhangFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Nam HoangFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Feng LengFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Lovely SaxenaFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Logan LeeFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Salvador AlejoFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Dandan QiFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Anthony KhalFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Hong SunFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and.
Fei Luthe Laboratory of Chemical Genomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen 518055, China.
Hui ZhangFrom the Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154 and hui.zhang@unlv.edu.
University of Nevada, Las Vegas · USPeking University · CN

Funding

Novel Regulation of Receptor Tyrosine Kinases by ASM (Acidic Sphingomyelinase)R15NS096694 · NINDS · UNIVERSITY OF NEVADA LAS VEGAS · PI SUN, HONG · 2016 to 2016
$428k
Control of Epigenetic Inheritance By ProteolysisR15GM116087 · NIGMS · UNIVERSITY OF NEVADA LAS VEGAS · PI ZHANG, HUI · 2015 to 2015
$362k
NIGMS NIH HHS R15 GM116087NINDS NIH HHS R15 NS096694
6 · The paper itself

Abstract

The pluripotency-controlling stem-cell protein SRY-box 2 (SOX2) plays a pivotal role in maintaining the self-renewal and pluripotency of embryonic stem cells and also of teratocarcinoma or embryonic carcinoma cells. SOX2 is monomethylated at lysine 119 (Lys-119) in mouse embryonic stem cells by the SET7 methyltransferase, and this methylation triggers ubiquitin-dependent SOX2 proteolysis. However, the molecular regulators and mechanisms controlling SET7-induced SOX2 proteolysis are unknown. Here, we report that in human ovarian teratocarcinoma PA-1 cells, methylation-dependent SOX2 proteolysis is dynamically regulated by the LSD1 lysine demethylase and a methyl-binding protein, PHD finger protein 20-like 1 (PHF20L1). We found that LSD1 not only removes the methyl group from monomethylated Lys-117 (equivalent to Lys-119 in mouse SOX2), but it also demethylates monomethylated Lys-42 in SOX2, a reaction that SET7 also regulated and that also triggered SOX2 proteolysis. Our studies further revealed that PHF20L1 binds both monomethylated Lys-42 and Lys-117 in SOX2 and thereby prevents SOX2 proteolysis. Down-regulation of either LSD1 or PHF20L1 promoted SOX2 proteolysis, which was prevented by SET7 inactivation in both PA-1 and mouse embryonic stem cells. Our studies also disclosed that LSD1 and PHF20L1 normally regulate the growth of pluripotent mouse embryonic stem cells and PA-1 cells by preventing methylation-dependent SOX2 proteolysis. In conclusion, our findings reveal an important mechanism by which the stability of the pluripotency-controlling stem-cell protein SOX2 is dynamically regulated by the activities of SET7, LSD1, and PHF20L1 in pluripotent stem cells.

Indexed as

Protein Processing, Post-TranslationalAmino Acid SubstitutionAnimalsCell Line, TumorCells, CulturedChromosomal Proteins, Non-HistoneEmbryonic Stem CellsFemaleHEK293 CellsHistone DemethylasesHistone-Lysine N-MethyltransferaseHumansMethylationMice, Inbred C57BLMutationNeoplasm ProteinsChromosomal Proteins, Non-HistoneHistone DemethylasesHistone-Lysine N-MethyltransferaseKDM1A protein, humanNeoplasm ProteinsPHF20L1 protein, humanRecombinant Fusion ProteinsSETD7 protein, humanSOX2 protein, humanSOXB1 Transcription Factorscancer stem cellsLSD1MethylationPHF20L1pluripotencypost-translational modification (PTM)SET7SOX2stem cellsubiquitin-dependent protease

Identifiers

PMID29358331
PMCPMC5846134
OpenAlexW2785163754

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.