Evidence map›Paper›PMID 29357355›Full record

ArticlePLoS genetics2018

The Arabidopsis SUMO E3 ligase SIZ1 mediates the temperature dependent trade-off between plant immunity and growth.

Valentin Hammoudi, Like Fokkens, Bas Beerens, Georgios Vlachakis, Sayantani Chatterjee, Manuel Arroyo-Mateos, Paul F K Wackers, Martijs J Jonker, Harrold A van den Burg

Abstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  16. TOPLESS in the regulation of plant immunity.Plant molecular biology · 2022
    Review
  17. Review
  18. Interplay between CaInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Valentin HammoudiMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.ORCID 0000-0002-8665-1749
Like FokkensMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.ORCID 0000-0001-6696-4409
Bas BeerensMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.ORCID 0000-0003-4003-4486
Georgios VlachakisMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.
Sayantani ChatterjeeMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.
Manuel Arroyo-MateosMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.
Paul F K WackersRNA Biology and Applied Bioinformatics, University of Amsterdam, Amsterdam, The Netherlands.
Martijs J JonkerRNA Biology and Applied Bioinformatics, University of Amsterdam, Amsterdam, The Netherlands.
Harrold A van den BurgMolecular Plant Pathology, University of Amsterdam, Amsterdam, The Netherlands.ORCID 0000-0003-4142-374X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increased ambient temperature is inhibitory to plant immunity including auto-immunity. SNC1-dependent auto-immunity is, for example, fully suppressed at 28°C. We found that the Arabidopsis sumoylation mutant siz1 displays SNC1-dependent auto-immunity at 22°C but also at 28°C, which was EDS1 dependent at both temperatures. This siz1 auto-immune phenotype provided enhanced resistance to Pseudomonas at both temperatures. Moreover, the rosette size of siz1 recovered only weakly at 28°C, while this temperature fully rescues the growth defects of other SNC1-dependent auto-immune mutants. This thermo-insensitivity of siz1 correlated with a compromised thermosensory growth response, which was independent of the immune regulators PAD4 or SNC1. Our data reveal that this high temperature induced growth response strongly depends on COP1, while SIZ1 controls the amplitude of this growth response. This latter notion is supported by transcriptomics data, i.e. SIZ1 controls the amplitude and timing of high temperature transcriptional changes including a subset of the PIF4/BZR1 gene targets. Combined our data signify that SIZ1 suppresses an SNC1-dependent resistance response at both normal and high temperatures. At the same time, SIZ1 amplifies the dark and high temperature growth response, likely via COP1 and upstream of gene regulation by PIF4 and BRZ1.

Indexed as

TemperatureAcclimatizationArabidopsisArabidopsis ProteinsBody Temperature RegulationGene Expression Regulation, PlantLigasesPhenotypePlant ImmunityPlants, Genetically ModifiedSignal TransductionUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisLigasesSIZ1 protein, ArabidopsisSNC1 protein, ArabidopsisUbiquitin-Protein Ligases

Identifiers

PMID29357355
PMCPMC5794169

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.