Evidence map›Paper›PMID 29357354›Full record

ArticlePLoS genetics2018

Repression of branched-chain amino acid synthesis in Staphylococcus aureus is mediated by isoleucine via CodY, and by a leucine-rich attenuator peptide.

Julienne C Kaiser, Alyssa N King, Jason C Grigg, Jessica R Sheldon, David R Edgell, Michael E P Murphy, Shaun R Brinsmade, David E Heinrichs

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 85 citations in OpenAlex.

  1. InJournal of bacteriology · 2026
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  4. InbioRxiv : the preprint server for biology · 2026
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  19. ThemBio · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Julienne C KaiserDepartment of Microbiology and Immunology, University of Western Ontario, London, Ontario, Canada.
Alyssa N KingDepartment of Biology, Georgetown University, Washington, DC, United States of America.
Jason C GriggDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.
Jessica R SheldonDepartment of Microbiology and Immunology, University of Western Ontario, London, Ontario, Canada.
David R EdgellDepartment of Biochemistry, University of Western Ontario, London, Ontario, Canada.ORCID 0000-0003-3858-6150
Michael E P MurphyDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.
Shaun R BrinsmadeDepartment of Biology, Georgetown University, Washington, DC, United States of America.
David E HeinrichsDepartment of Microbiology and Immunology, University of Western Ontario, London, Ontario, Canada.ORCID 0000-0002-7217-2456
Western University · CAGeorgetown University · USUniversity of British Columbia · CA

Funding

Integrating Global Responses to Nutrient Limitation in Gram-positive BacteriaR00GM099893 · NIGMS · GEORGETOWN UNIVERSITY · PI BRINSMADE, SHAUN R · 2013 to 2015
$725k
Integrating Global Responses to Nutrient Limitation in Gram-positive BacteriaK99GM099893 · NIGMS · TUFTS UNIVERSITY BOSTON · PI BRINSMADE, SHAUN R · 2012 to 2012
$90k
NIGMS NIH HHS K99 GM099893NIGMS NIH HHS R00 GM099893NIH HHS GM099893
6 · The paper itself

Abstract

Staphylococcus aureus requires branched-chain amino acids (BCAAs; isoleucine, leucine, valine) for protein synthesis, branched-chain fatty acid synthesis, and environmental adaptation by responding to their availability via the global transcriptional regulator CodY. The importance of BCAAs for S. aureus physiology necessitates that it either synthesize them or scavenge them from the environment. Indeed S. aureus uses specialized transporters to scavenge BCAAs, however, its ability to synthesize them has remained conflicted by reports that it is auxotrophic for leucine and valine despite carrying an intact BCAA biosynthetic operon. In revisiting these findings, we have observed that S. aureus can engage in leucine and valine synthesis, but the level of BCAA synthesis is dependent on the BCAA it is deprived of, leading us to hypothesize that each BCAA differentially regulates the biosynthetic operon. Here we show that two mechanisms of transcriptional repression regulate the level of endogenous BCAA biosynthesis in response to specific BCAA availability. We identify a trans-acting mechanism involving isoleucine-dependent repression by the global transcriptional regulator CodY and a cis-acting leucine-responsive attenuator, uncovering how S. aureus regulates endogenous biosynthesis in response to exogenous BCAA availability. Moreover, given that isoleucine can dominate CodY-dependent regulation of BCAA biosynthesis, and that CodY is a global regulator of metabolism and virulence in S. aureus, we extend the importance of isoleucine availability for CodY-dependent regulation of other metabolic and virulence genes. These data resolve the previous conflicting observations regarding BCAA biosynthesis, and reveal the environmental signals that not only induce BCAA biosynthesis, but that could also have broader consequences on S. aureus environmental adaptation and virulence via CodY.

Indexed as

Adaptation, BiologicalAmino Acids, Branched-ChainBacterial ProteinsDown-RegulationEnvironmentGene Expression Regulation, BacterialIsoleucineLeucineMetabolic Networks and PathwaysOrganisms, Genetically ModifiedRepressor ProteinsStaphylococcus aureusVirulenceAmino Acids, Branched-ChainBacterial ProteinsCodY protein, Staphylococcus aureusIsoleucineLeucineRepressor Proteins

Identifiers

PMID29357354
PMCPMC5794164
OpenAlexW2784783226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.