ArticlePlanta2018
Development of Thinopyrum ponticum-specific molecular markers and FISH probes based on SLAF-seq technology.
Article in Planta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.
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Who cites it
30 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Enhancing RNA Capture Efficiency in Spatial Transcriptomics: A Review of Innovative Technologies and Strategies.International journal of molecular sciences · 2025Pooled it
- The location and genome origin of alien chromatin in wheat founder parent Xiaoyan 6.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Utilization of theMolecular breeding : new strategies in plant improvement · 2024Review
- Development and identification of a novel wheat-Thinopyrum ponticum disomic substitution line DS5Ag(5D) with new genes conferring resistance to powdery mildew and leaf rust.BMC plant biology · 2024Article
- Identification and introgression of a novel leaf rust resistance gene from Thinopyrum intermedium chromosome 7JTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- The launch of satellite: DNA repeats as a cytogenetic tool in discovering the chromosomal universe of wild Triticeae.Chromosoma · 2023Review
- Physical mapping of a new powdery mildew resistance locus fromFrontiers in plant science · 2023Article
- RNA-seq analysis revealed considerable genetic diversity and enabled the development of specific KASP markers forFrontiers in plant science · 2023Article
- Genetic analysis of resistance to powdery mildew on 7MBMC plant biology · 2022Article
- Establishment and identification of six wheat-Thinopyrum ponticum disomic addition lines derived from partial amphiploid Xiaoyan 7430.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Cytogenetic identification and molecular marker development of a novel wheat-Thinopyrum ponticum translocation line with powdery mildew resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Identification and DNA Marker Development for a Wheat-International journal of molecular sciences · 2022Article
- Cytogenetic identification and molecular marker development of a novel wheat-Frontiers in plant science · 2022Article
- Article
- Molecular cytogenetics for a wheat-Aegilops geniculata 3MBMC plant biology · 2021Article
- Cytogenetic identification and molecular marker development for the novel stripe rust-resistant wheat-aBIOTECH · 2021Article
- Chromosomal composition analysis and molecular marker development for the novel Ug99-resistant wheat-Thinopyrum ponticum translocation line WTT34.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Identification of a Wheat-Frontiers in plant science · 2021Article
- Development of SpecificInternational journal of molecular sciences · 2020Article
- Molecular Cytogenetic Identification of Wheat-International journal of molecular sciences · 2020Article
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Authors and funding
8 authors.
Funding
Abstract
MAIN
conclusionBased on SLAF-seq, 67 Thinopyrum ponticum-specific markers and eight Th. ponticum-specific FISH probes were developed, and these markers and probes could be used for detection of alien chromatin in a wheat background. Decaploid Thinopyrum ponticum (2n = 10x = 70) is a valuable gene reservoir for wheat improvement. Identification of Th. ponticum introgression would facilitate its transfer into diverse wheat genetic backgrounds and its practical utilization in wheat improvement. Based on specific-locus-amplified fragment sequencing (SLAF-seq) technology, 67 new Th. ponticum-specific molecular markers and eight Th. ponticum-specific fluorescence in situ hybridization (FISH) probes have been developed from a tiny wheat-Th. ponticum translocation line. These newly developed molecular markers allowed the detection of Th. ponticum DNA in a variety of materials specifically and steadily at high throughput. According to the hybridization signal pattern, the eight Th. ponticum-specific probes could be divided into two groups. The first group including five dispersed repetitive sequence probes could identify Th. ponticum chromatin more sensitively and accurately than genomic in situ hybridization (GISH). Whereas the second group having three tandem repetitive sequence probes enabled the discrimination of Th. ponticum chromosomes together with another clone pAs1 in wheat-Th. ponticum partial amphiploid Xiaoyan 68.
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