ArticleFrontiers in plant science2017
A Community-Based Culture Collection for Targeting Novel Plant Growth-Promoting Bacteria from the Sugarcane Microbiome.
Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.
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Who cites it
58 citing papers in PubMed.
- Translational microbiomes in agriculture: microbial communities as tools to effect host and system health for improved crop production.Applied and environmental microbiology · 2026Review
- Spatial microbiome and synthetic community analyses reveal Trinickia sclerotiorum sp. nov. promotes sclerotia mortality of Sclerotinia sclerotiorum.The ISME journal · 2026Article
- From natural assemblages to synthetic communities in theFrontiers in plant science · 2026Article
- Interspecies interactions among sugarcane-associated bacteria and their impact on plant growth promotion traits.Frontiers in microbiology · 2026Article
- Refining the root-associated microbial consortia for enhanced biocontrol of the root-rot pathogen of corn.Frontiers in microbiology · 2026Article
- Rootstock microbiome as a target for manipulation to combat apple replant disease.Scientific reports · 2025Article
- Culturomics from field-grown crop plants using dilution to extinction, two-step library preparation and amplicon sequencing.Microbiology (Reading, England) · 2025Article
- Evaluating agar-plating and dilution-to-extinction isolation methods for generating oak-associated microbial culture collections.ISME communications · 2025Article
- Rationally designed microbial communities in agri-food production systems: from research to market.ISME communications · 2025Article
- Plant-microbe interactions: PGPM as microbial inoculants/biofertilizers for sustaining crop productivity and soil fertility.Current research in microbial sciences · 2025Review
- Toward Ecologically Relevant Genetics of Interactions Between Host Plants and Plant Growth-Promoting Bacteria.Advanced genetics (Hoboken, N.J.) · 2024Article
- Microbial Consortia: Promising Tool as Plant Bioinoculants for Agricultural Sustainability.Current microbiology · 2024Review
- Leaf surface microbiota transplantation confers resistance to coffee leaf rust in susceptible Coffea arabica.FEMS microbiology ecology · 2024Article
- Exploring the Metatranscriptome of Bacterial Communities of Two Moss Species Thriving in Different Environments-Terrestrial and Aquatic.Plants (Basel, Switzerland) · 2024Article
- Rational management of the plant microbiome for the Second Green Revolution.Plant communications · 2024Review
- The Bacterial and Fungal Compositions in the Rhizosphere ofMicroorganisms · 2024Article
- Drought stress mitigation through bioengineering of microbes and crop varieties for sustainable agriculture and food security.Current research in microbial sciences · 2024Review
- Soil microbiome engineering for sustainability in a changing environment.Nature biotechnology · 2023Review
- Plant Growth-Promoting Bacteria of Soil: Designing of Consortia Beneficial for Crop Production.Microorganisms · 2023Review
- Microbiota and the plant immune system work together to defend against pathogens.Archives of microbiology · 2023Review
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The soil-plant ecosystem harbors an immense microbial diversity that challenges investigative approaches to study traits underlying plant-microbe association. Studies solely based on culture-dependent techniques have overlooked most microbial diversity. Here we describe the concomitant use of culture-dependent and -independent techniques to target plant-beneficial microbial groups from the sugarcane microbiome. The community-based culture collection (CBC) approach was used to access microbes from roots and stalks. The CBC recovered 399 unique bacteria representing 15.9% of the rhizosphere core microbiome and 61.6-65.3% of the endophytic core microbiomes of stalks. By cross-referencing the CBC (culture-dependent) with the sugarcane microbiome profile (culture-independent), we designed a synthetic community comprised of naturally occurring highly abundant bacterial groups from roots and stalks, most of which has been poorly explored so far. We then used maize as a model to probe the abundance-based synthetic inoculant. We show that when inoculated in maize plants, members of the synthetic community efficiently colonize plant organs, displace the natural microbiota and dominate at 53.9% of the rhizosphere microbial abundance. As a result, inoculated plants increased biomass by 3.4-fold as compared to uninoculated plants. The results demonstrate that abundance-based synthetic inoculants can be successfully applied to recover beneficial plant microbes from plant microbiota.
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