Evidence map›Paper›PMID 29353346›Full record

ArticleForensic science, medicine, and pathology2018

Singleplex quantitative real-time PCR for the assessment of human mitochondrial DNA quantity and quality.

Corey Goodwin, Denice Higgins, Shanan S Tobe, Jeremy Austin, Andrew Wotherspoon, Michelle E Gahan, Dennis McNevin

Abstract read
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In one paragraph

Article in Forensic science, medicine, and pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. DNA and protein analyses of hair in forensic genetics.International journal of legal medicine · 2023
    Review
  3. Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Corey GoodwinNational Centre for Forensic Studies, Faculty of Education, Science, Technology and Mathematics, University of Canberra, Bruce, Canberra, Australian Capital Territory, 2617, Australia. Corey.Goodwin@canberra.edu.au.ORCID http://orcid.org/0000-0002-3279-4840
Denice HigginsAustralian Centre for Ancient DNA, School of Biological Sciences, University of Adelaide, North Terrace, Adelaide, South Australia, 5005, Australia.
Shanan S TobeDepartment of Chemistry and Physics, Arcadia University, Glenside, PA, 19038, USA.
Jeremy AustinAustralian Centre for Ancient DNA, School of Biological Sciences, University of Adelaide, North Terrace, Adelaide, South Australia, 5005, Australia.
Andrew WotherspoonAustralian Nuclear Science and Technology Organization, Lucas Heights, Sydney, New South Wales, 2234, Australia.
Michelle E GahanNational Centre for Forensic Studies, Faculty of Education, Science, Technology and Mathematics, University of Canberra, Bruce, Canberra, Australian Capital Territory, 2617, Australia.
Dennis McNevinNational Centre for Forensic Studies, Faculty of Education, Science, Technology and Mathematics, University of Canberra, Bruce, Canberra, Australian Capital Territory, 2617, Australia.
University of Canberra · AUThe University of Adelaide · AUAustralian Nuclear Science and Technology Organisation · AUFlinders University · AU

Funding

Australian Institute of Nuclear Science and Engineering ALNSTU11896
6 · The paper itself

Abstract

Mitochondrial DNA (mtDNA) can provide a means for forensic identity testing when genotyping of nuclear DNA (nuDNA) targets is not possible due to degradation or lack of template. For degraded samples, an indication of the quantity and quality of mtDNA is essential to allow selection of appropriately sized targets for hypervariable region (HVR) analysis, which may conserve sample and resources. Three human-specific mtDNA targets of increasing length (86, 190 and 452 base pairs) were amplified by singleplex quantitative real-time PCR (qPCR), capable of providing an index of mtDNA degradation from fragment length information. Quantification was achieved by preparation of a standard curve for each target, using a purified mtDNA standard containing all three targets of interest, which produced a linear, accurate and precise result from 1×10

Indexed as

DNA Degradation, NecroticDNA, MitochondrialDNA PrimersElectrophoresis, Agar GelHumansReal-Time Polymerase Chain ReactionRNA, RibosomalRNA, Ribosomal, 16SDNA, MitochondrialDNA PrimersRNA, RibosomalRNA, ribosomal, 12SRNA, Ribosomal, 16SDegradationMitochondrial DNAQuantificationQuantitative real-time PCRSYBR green

Identifiers

PMID29353346
OpenAlexW2794217051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.