Evidence map›Paper›PMID 29353158›Full record

ArticleFree radical biology & medicine2018

Quantification of light-induced miniSOG superoxide production using the selective marker, 2-hydroxyethidium.

Miriam E Barnett, Timothy M Baran, Thomas H Foster, Andrew P Wojtovich

Abstract read
In one paragraph

Article in Free radical biology & medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. To activate NAD(P)H oxidase with a brief pulse of photodynamic action.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Photophysics of a protein-bound derivative of malachite green that sensitizes the production of singlet oxygen.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Article
  10. Optical manipulation of molecular function by chromophore-assisted light inactivation.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2021
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Light-induced oxidant production by fluorescent proteins.Free radical biology & medicine · 2018
    Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Miriam E BarnettUniversity of Rochester Medical Center, Department of Pharmacology and Physiology, Rochester 14642, United States.
Timothy M BaranUniversity of Rochester Medical Center, Department of Imaging Sciences, Rochester 14642, United States.
Thomas H FosterUniversity of Rochester Medical Center, Department of Imaging Sciences, Rochester 14642, United States.
Andrew P WojtovichUniversity of Rochester Medical Center, Department of Pharmacology and Physiology, Rochester 14642, United States; University of Rochester Medical Center, Department of Anesthesiology and Perioperative Medicine, Rochester 14642. United States. Electronic address: Andrew_Wojtovich@urmc.rochester.edu.
University of Rochester Medical Center · US

Funding

Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
Mitochondrial ROS Microdomains and Neuronal IschemiaR01NS092558 · NINDS · UNIVERSITY OF ROCHESTER · PI WOJTOVICH, ANDREW PHILLIP · 2015 to 2025
$3.7M
NIGMS NIH HHS T32 GM068411NINDS NIH HHS R01 NS092558
6 · The paper itself

Abstract

Genetically-encoded photosensitizers produce reactive oxygen species (ROS) in response to light. Transgenic expression of fusion proteins can target the photosensitizers to specific cell regions and permit the spatial and temporal control of ROS production. These ROS-generating proteins (RGPs) are widely used for cell ablation, mutagenesis and chromophore-assisted light inactivation of target proteins. However, the species produced by RGPs are unclear due to indirect measures with confounding interpretations. Recently, the RGP mini "Singlet Oxygen Generator" (miniSOG) was engineered from Arabidopsis thaliana phototropin 2. While miniSOG produces singlet oxygen (

Indexed as

AnimalsArabidopsisArabidopsis ProteinsCattleCell DeathEthidiumFlavoproteinsGenetic EngineeringHumansLightLiverNeoplasmsOxidation-ReductionPhotosensitizing AgentsPhototherapyPhototropinsArabidopsis ProteinsdihydroethidiumEthidiumFlavoproteinsPhotosensitizing AgentsPhototropinsReactive Oxygen SpeciesSinglet OxygenFlavin mononucleotideMiniSOGReactive oxygen speciesSinglet oxygenSuperoxide

Identifiers

PMID29353158
PMCPMC5815924
OpenAlexW2792621007

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.