Evidence map›Paper›PMID 29352811›Full record

ArticleBMC research notes2018

Single nucleotide polymorphisms in genes encoding penicillin-binding proteins in β-lactamase-negative ampicillin-resistant Haemophilus influenzae in Japan.

Kazuhisa Misawa, Norihito Tarumoto, Shinsuke Tamura, Morichika Osa, Takaaki Hamamoto, Atsushi Yuki, Yuji Kouzaki, Kazuo Imai, Runtuwene Lucky Ronald, Toshiyuki Yamaguchi and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Detection of drug resistance inFrontiers in veterinary science · 2024
    Article
  4. Study on the drug resistance and pathogenicity ofFrontiers in microbiology · 2022
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Kazuhisa MisawaDepartment of Infectious Diseases and Pulmonary Medicine, National Defense Medical College, Saitama, Japan.
Norihito TarumotoDepartment of Infectious Disease and Infection Control, Saitama Medical University, Saitama, Japan.
Shinsuke TamuraDepartment of Pediatrics, National Defense Medical College, Saitama, Japan.
Morichika OsaDepartment of Infectious Diseases and Pulmonary Medicine, National Defense Medical College, Saitama, Japan.
Takaaki HamamotoDepartment of Laboratory Medicine, National Defense Medical College Hospital, Saitama, Japan.
Atsushi YukiDepartment of Laboratory Medicine, National Defense Medical College Hospital, Saitama, Japan.
Yuji KouzakiDepartment of Infectious Diseases and Pulmonary Medicine, National Defense Medical College, Saitama, Japan.
Kazuo ImaiDepartment of Infectious Diseases and Pulmonary Medicine, National Defense Medical College, Saitama, Japan.
Runtuwene Lucky RonaldDepartment of Computational Biology and Medical Science, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
Toshiyuki YamaguchiDepartment of Infectious Disease and Infection Control, Saitama Medical University, Saitama, Japan.
Takashi MurakamiCenter for Clinical Infectious Diseases and Research, Saitama Medical University, Saitama, Japan.
Shigefumi MaesakiDepartment of Infectious Disease and Infection Control, Saitama Medical University, Saitama, Japan.
Yutaka SuzukiDepartment of Computational Biology and Medical Science, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
Akihiko KawanaDepartment of Infectious Diseases and Pulmonary Medicine, National Defense Medical College, Saitama, Japan.
Takuya MaedaDepartment of Laboratory Medicine, National Defense Medical College Hospital, Saitama, Japan. t_maeda@saitama-med.ac.jp.ORCID http://orcid.org/0000-0003-0912-4643
National Defense Medical College · JPSaitama Medical University · JPNational Defense Medical College Hospital · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveβ-Lactamase-negative ampicillin-resistant Haemophilus influenzae is a common opportunistic pathogen of hospital- and community-acquired infections, harboring multiple single nucleotide polymorphisms in the ftsI gene, which codes for penicillin-binding protein-3. The objectives of this study were to perform comprehensive genetic analyses of whole regions of the penicillin-binding proteins in H. influenzae and to identify additional single nucleotide polymorphisms related to antibiotic resistance, especially to ampicillin and other cephalosporins.

resultsIn this genome analysis of the ftsI gene in 27 strains of H. influenzae, 10 of 23 (43.5%) specimens of group III genotype β-lactamase-negative ampicillin-resistant H. influenzae were paradoxically classified as ampicillin-sensitive phenotypes. Unfortunately, we could not identify any novel mutations that were significantly associated with ampicillin minimum inhibitory concentrations in other regions of the penicillin-binding proteins, and we reconfirmed that susceptibility to β-lactam antibiotics was mainly defined by previously reported SNPs in the ftsI gene. We should also consider detailed changes in expression that lead to antibiotic resistance in the future because the acquisition of resistance to antimicrobials can be predicted by the expression levels of a small number of genes.

Indexed as

Polymorphism, Single NucleotideAmpicillinAmpicillin ResistanceAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesGenotypeHaemophilus InfectionsHaemophilus influenzaeHumansMicrobial Sensitivity TestsPenicillin-Binding ProteinsAmpicillinAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesPenicillin-Binding ProteinsHaemophilus influenzaePenicillin binding proteinSNPβ-Lactamase-negative ampicillin-resistant (BLNAR)

Identifiers

PMID29352811
PMCPMC5775570
OpenAlexW2784419190

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.