Evidence map›Paper›PMID 29352562›Full record

ArticleMolecular genetics & genomic medicine2018

CBS mutations are good predictors for B6-responsiveness: A study based on the analysis of 35 Brazilian Classical Homocystinuria patients.

Soraia Poloni, Fernanda Sperb-Ludwig, Taciane Borsatto, Giovana Weber Hoss, Maria Juliana R Doriqui, Emília K Embiruçu, Ney Boa-Sorte, Charles Marques, Chong A Kim, Carolina Fischinger Moura de Souza and 14 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Quantitative imaging in medicine and surgery · 2023
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Cardiovascular findings in classic homocystinuria.Molecular genetics and metabolism reports · 2020
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 13 institutions in 2 countries.

Soraia PoloniPost-Graduation Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Fernanda Sperb-LudwigPost-Graduation Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Taciane BorsattoPost-Graduation Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Giovana Weber HossPost-Graduation Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Maria Juliana R DoriquiComplexo Hospitalar Materno-Infantil do Maranhão, São Luis, Brazil.
Emília K EmbiruçuComplexo Hospitalar Professor Edgard Santos, Universidade do Estado da Bahia, Salvador, Brazil.
Ney Boa-SorteComplexo Hospitalar Professor Edgard Santos, Universidade do Estado da Bahia, Salvador, Brazil.
Charles MarquesHospital das Clínicas de Ribeirão Preto, Ribeirão Preto, Brazil.
Chong A KimUniversidade de São Paulo, São Paulo, Brazil.
Carolina Fischinger Moura de SouzaMedical Genetics Service, Hospital de Clínicas de Porto Alegre, Porto Alegre, Brazil.
Helio RochaUniversidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Marcia RibeiroUniversidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Carlos E SteinerUniversidade Estadual de Campinas, Campinas, Brazil.
Carolina A MorenoUniversidade Estadual de Campinas, Campinas, Brazil.
Pricila BernardiUniversidade Federal de Santa Catarina, Florianópolis, Brazil.
Eugenia ValadaresUniversidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Osvaldo ArtigalasChildren's Hospital, Grupo Hospitalar Conceição, Porto Alegre, Brazil.
Gerson CarvalhoHospital de Apoio de Brasília, Brasília, Brazil.
Hector Y C WanderleyEscola Superior de Ciências da Santa Casa de Misericórdia de Vitória, Vitória, Brazil.
Johanna KugeleLaboratory for Clinical Biochemistry and Metabolism, University Medical Center, Freiburg, Germany.
Melanie WalterLaboratory for Clinical Biochemistry and Metabolism, University Medical Center, Freiburg, Germany.
Lorena Gallego-VillarLaboratory for Clinical Biochemistry and Metabolism, University Medical Center, Freiburg, Germany.
Henk J BlomLaboratory for Clinical Biochemistry and Metabolism, University Medical Center, Freiburg, Germany.
Ida Vanessa D SchwartzPost-Graduation Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.ORCID 0000-0002-7933-6687
Universidade Federal do Rio Grande do Sul · BRUniversity Medical Center Freiburg · DEUniversidade do Estado da Bahia · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversidade Federal do Rio de Janeiro · BRClinics Hospital of Ribeirão Preto · BREscola Superior de Ciências da Santa Casa de Misericórdia de Vitória · BRGrupo Hospitalar Conceição · BRHospital de Clínicas de Porto Alegre · BRHospital Universitário de Brasília · BRUniversidade de São Paulo · BRUniversidade Federal de Minas Gerais · BRUniversidade Federal de Santa Catarina · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundClassical homocystinuria (HCU) is a monogenic disease caused by the deficient activity of cystathionine β-synthase (CβS). The objective of this study was to identify the CBS mutations in Brazilian patients with HCU.

methodsgDNA samples were obtained for 35 patients (30 families) with biochemically confirmed diagnosis of HCU. All exons and exon-intron boundaries of CBS gene were sequenced. Gene expression analysis by qRT-PCR was performed in six patients. Novel missense point mutations were expressed in E. coli by site-directed mutagenesis.

resultsParental consanguinity was reported in 16 families, and pyridoxine responsiveness in five (15%) patients. Among individuals from the same family, all presented the same phenotype. Both pathogenic mutations were identified in 29/30 patients. Twenty-one different mutations were detected in nine exons and three introns; being six common mutations. Most prevalent were p.Ile278Thr (18.2%), p.Trp323Ter (11.3%), p.Thr191Met (11.3%), and c.828+1G>A (11.3%). Eight novel mutations were found [c.2T>C, c.209+1delG, c.284T>C, c.329A>T, c.444delG, c.864_868delGAG c.989_991delAGG, and c.1223+5G>T]. Enzyme activity in E. coli-expressed mutations was 1.5% for c.329A>T and 17.5% for c.284T>C. qRT-PCR analysis revealed reduced gene expression in all evaluated genotypes: [c.209+1delG; c.572C>T]; [c.2T>C; c.828+1G>A]; [c.828+1G>A; c.1126G>A]; [c.833T>C; c.989_991delAGG]; [c.1058C>T; c.146C>T]; and [c.444delG; c.444delG]. The expected phenotype according to the genotype (pyridoxine responsiveness) matched in all cases.

conclusionsMost patients studied were pyridoxine nonresponsive and presented early manifestations, suggesting severe phenotypes. Many private mutations were observed, but the four most prevalent mutations together accounted for over 50% of mutated alleles. A good genotype-phenotype relationship was observed within families and for the four most common mutations.

Indexed as

AdolescentAdultAllelesBase SequenceBiomarkers, PharmacologicalBrazilChildCystathionine beta-SynthaseExonsFemaleGene ExpressionGenetic Association StudiesGenetic Predisposition to DiseaseHomocystinuriaHumansMaleBiomarkers, PharmacologicalCystathionine beta-SynthasePyridoxineCBS mutationsclassical homocystinuriaCβS deficiencyCβS expressionhomocysteine

Identifiers

PMID29352562
PMCPMC5902399
OpenAlexW2790064648

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.