Evidence map›Paper›PMID 29352003›Full record

Observational studyJournal of immunology (Baltimore, Md. : 1950)2018

Gene Expression Signatures Characterized by Longitudinal Stability and Interindividual Variability Delineate Baseline Phenotypic Groups with Distinct Responses to Immune Stimulation.

Adam D Scheid, Virginia P Van Keulen, Sara J Felts, Steven C Neier, Sumit Middha, Asha A Nair, Robert W Techentin, Barry K Gilbert, Jin Jen, Claudia Neuhauser and 2 more

Abstract readObservational Study
In one paragraph

Observational study in Journal of immunology (Baltimore, Md. : 1950), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Adam D ScheidImmunology Program, Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.
Virginia P Van KeulenDepartment of Immunology, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.ORCID 0000-0001-6496-1095
Sara J FeltsDepartment of Immunology, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.ORCID 0000-0003-3686-2617
Steven C NeierImmunology Program, Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.
Sumit MiddhaDivision of Biomedical Statistics and Informatics, Department of Health Sciences, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.ORCID 0000-0003-4135-6268
Asha A NairDivision of Biomedical Statistics and Informatics, Department of Health Sciences, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.
Robert W TechentinSpecial Purpose Processor Development Group, Mayo Clinic, Rochester, MN 55901.
Barry K GilbertSpecial Purpose Processor Development Group, Mayo Clinic, Rochester, MN 55901.
Jin JenMedical Genome Facility Gene Expression Core and Department of Experimental Pathology and Laboratory Medicine, Mayo Clinic, Rochester, MN 55905; and.
Claudia NeuhauserInformatics Institute, University of Minnesota, Minneapolis, MN 55455.ORCID 0000-0001-8932-675X
Yuji ZhangDivision of Biomedical Statistics and Informatics, Department of Health Sciences, Mayo Clinic College of Medicine and Science, Rochester, MN 55905.
Larry R PeaseImmunology Program, Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic College of Medicine and Science, Rochester, MN 55905; pease.larry@mayo.edu.

Funding

PHD TRAINING PROGRAM IN BASIC IMMUNOLOGYT32AI007425 · NIAID · MAYO CLINIC ROCHESTER · PI SHAPIRO, VIRGINIA SMITH · 1995 to 2020
$3.6M
NIAID NIH HHS T32 AI007425
6 · The paper itself

Abstract

Human immunity exhibits remarkable heterogeneity among individuals, which engenders variable responses to immune perturbations in human populations. Population studies reveal that, in addition to interindividual heterogeneity, systemic immune signatures display longitudinal stability within individuals, and these signatures may reliably dictate how given individuals respond to immune perturbations. We hypothesize that analyzing relationships among these signatures at the population level may uncover baseline immune phenotypes that correspond with response outcomes to immune stimuli. To test this, we quantified global gene expression in peripheral blood CD4

Indexed as

CD28 AntigensCD3 ComplexCD4-Positive T-LymphocytesGene ExpressionHumansLymphocyte ActivationPhenotypeTranscriptomeCD28 AntigensCD3 Complex

Identifiers

PMID29352003
PMCPMC5821558

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.