Evidence map›Paper›PMID 29351588›Full record

ArticleAnnals of botany2018

Sorghum root-system classification in contrasting P environments reveals three main rooting types and root-architecture-related marker-trait associations.

Sebastian Parra-Londono, Mareike Kavka, Birgit Samans, Rod Snowdon, Silke Wieckhorst, Ralf Uptmoor

Abstract read
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Article in Annals of botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
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  7. Early exposure to phosphorus starvation induces genetically determined responses in Sorghum bicolor roots.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  8. Article
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  11. Genetic dissection of root architecture in Ethiopian sorghum landraces.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
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  15. Review
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  18. Sorghum breeding in the genomic era: opportunities and challenges.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

Sebastian Parra-LondonoChair of Agronomy, University of Rostock, Rostock, Germany.
Mareike KavkaChair of Agronomy, University of Rostock, Rostock, Germany.
Birgit SamansDepartment of Plant Breeding, Justus Liebig University Gießen, Gießen, Germany.
Rod SnowdonDepartment of Plant Breeding, Justus Liebig University Gießen, Gießen, Germany.
Silke WieckhorstKWS SAAT SE, Grimsehlstraße, Einbeck, Germany.
Ralf UptmoorChair of Agronomy, University of Rostock, Rostock, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Aims: Roots facilitate acquisition of macro- and micronutrients, which are crucial for plant productivity and anchorage in the soil. Phosphorus (P) is rapidly immobilized in the soil and hardly available for plants. Adaptation to P scarcity relies on changes in root morphology towards rooting systems well suited for topsoil foraging. Root-system architecture (RSA) defines the spatial organization of the network comprising primary, lateral and stem-derived roots and is important for adaptation to stress conditions. RSA phenotyping is a challenging task and essential for understanding root development. Methods: In this study, 19 traits describing RSA were analysed in a diversity panel comprising 194 sorghum genotypes, fingerprinted with a 90-k single-nucleotide polymorphism (SNP) array and grown under low and high P availability. Key Results: Multivariate analysis was conducted and revealed three different RSA types: (1) a small root system; (2) a compact and bushy rooting type; and (3) an exploratory root system, which might benefit plant growth and development if water, nitrogen (N) or P availability is limited. While several genotypes displayed similar rooting types in different environments, others responded to P scarcity positively by developing more exploratory root systems, or negatively with root growth suppression. Genome-wide association studies revealed significant quantitative trait loci (P < 2.9 × 10-6) on chromosomes SBI-02, SBI-03, SBI-05 and SBI-09. Co-localization of significant and suggestive (P < 5.7 × 10-5) associations for several traits indicated hotspots controlling root-system development on chromosomes SBI-02 and SBI-03. Conclusions: Sorghum genotypes with a compact, bushy and shallow root system provide potential adaptation to P scarcity in the field by allowing thorough topsoil foraging, while genotypes with an exploratory root system may be advantageous if N or water is the limiting factor, although such genotypes showed highest P uptake levels under the artificial conditions of the present study.

Indexed as

Genome-Wide Association StudyPhenotypePhosphorusPlant RootsPolymorphism, Single NucleotideQuantitative Trait, HeritableQuantitative Trait LociSoilSorghumPhosphorusSoilgenome-wide association studiesphosphorus scarcityRoot-system architectureroot-system classificationsorghum

Identifiers

PMID29351588
PMCPMC5808808

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.