Evidence map›Paper›PMID 29350623›Full record

ArticleJournal of physics. Condensed matter : an Institute of Physics journal2018

Exploring the role of genome and structural ions in preventing viral capsid collapse during dehydration.

Natalia Martín-González, Sofía M Guérin Darvas, Aritz Durana, Gerardo A Marti, Diego M A Guérin, Pedro J de Pablo

Open access · greenAbstract read
In one paragraph

Article in Journal of physics. Condensed matter : an Institute of Physics journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Natalia Martín-GonzálezDepartamento de Física de la Materia Condensada C-III and Instituto de Física de la Materia Condensada (IFIMAC), Universidad Autónoma de Madrid, Cantoblanco 28049 Madrid, Spain.
Sofía M Guérin DarvasDepartment of Biochemistry and Molecular Biology, University of the Basque Country (UPV/EHU), Barrio Sarriena S/N, 48940, Leioa, Vizcaya, Spain.
Aritz DuranaInstituto Biofisika (IBF, UPV/EHU, CSIC), Parque Científico de la UPV/EHU, Barrio Sarriena S/N, 48940, Leioa, Vizcaya, Spain.
Gerardo A MartiCentro de Estudios Parasitológicos y de Vectores (CEPAVE-CCT-La Plata-CONICET-UNLP), Boulevard 120 e/61 y 62, 1900 La Plata, Argentina.
Diego M A GuérinDepartment of Biochemistry and Molecular Biology, University of the Basque Country (UPV/EHU), Barrio Sarriena S/N, 48940, Leioa, Vizcaya, Spain.ORCID 0000-0001-8504-9636
Pedro J de PabloDepartamento de Física de la Materia Condensada C-III and Instituto de Física de la Materia Condensada (IFIMAC), Universidad Autónoma de Madrid, Cantoblanco 28049 Madrid, Spain.ORCID 0000-0003-2386-3186
Instituto Biofisika · ESUniversidad Autónoma de Madrid · ESConsejo Nacional de Investigaciones Científicas y Técnicas · ARUniversity of the Basque Country · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Even though viruses evolve mainly in liquid milieu, their horizontal transmission routes often include episodes of dry environment. Along their life cycle, some insect viruses, such as viruses from the Dicistroviridae family, withstand dehydrated conditions with presently unknown consequences to their structural stability. Here, we use atomic force microscopy to monitor the structural changes of viral particles of Triatoma virus (TrV) after desiccation. Our results demonstrate that TrV capsids preserve their genome inside, conserving their height after exposure to dehydrating conditions, which is in stark contrast with other viruses that expel their genome when desiccated. Moreover, empty capsids (without genome) resulted in collapsed particles after desiccation. We also explored the role of structural ions in the dehydration process of the virions (capsid containing genome) by chelating the accessible cations from the external solvent milieu. We observed that ion suppression helps to keep the virus height upon desiccation. Our results show that under drying conditions, the genome of TrV prevents the capsid from collapsing during dehydration, while the structural ions are responsible for promoting solvent exchange through the virion wall.

Indexed as

CapsidDicistroviridaeGenome, ViralModels, MolecularMolecular ConformationSolventsWaterSolventsWater

Identifiers

PMID29350623
PMCPMC7104708
OpenAlexW2790246899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.