Evidence map›Paper›PMID 29348627›Full record

ArticleScientific reports2018

Chikungunya virus nsP1 interacts directly with nsP2 and modulates its ATPase activity.

Sameer Kumar, Abhishek Kumar, Prabhudutta Mamidi, Atul Tiwari, Sriram Kumar, Animamalar Mayavannan, Sagarika Mudulli, Ajit Kumar Singh, Bharat Bhusan Subudhi, Soma Chattopadhyay

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

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  10. Telmisartan Restricts Chikungunya Virus InfectionAntimicrobial agents and chemotherapy · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Sameer KumarInstitute of Life Sciences, Bhubaneswar, India.
Abhishek KumarInstitute of Life Sciences, Bhubaneswar, India.
Prabhudutta MamidiInstitute of Life Sciences, Bhubaneswar, India.
Atul TiwariBanaras Hindu University, Varanasi, U.P., India.
Sriram KumarAnna University, Chennai, India.ORCID http://orcid.org/0000-0001-6464-1219
Animamalar MayavannanAnna University, Chennai, India.
Sagarika MudulliInstitute of Life Sciences, Bhubaneswar, India.
Ajit Kumar SinghInstitute of Life Sciences, Bhubaneswar, India.
Bharat Bhusan SubudhiSchool of Pharmaceutical Sciences, Siksha O Anusandhan University, Bhubaneswar, India.
Soma ChattopadhyayInstitute of Life Sciences, Bhubaneswar, India. sochat.ils@gmail.com.
Institute of Life Sciences · INAnna University, Chennai · INBanaras Hindu University · INSiksha O Anusandhan University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chikungunya virus (CHIKV) is a mosquito-borne virus, which has created an alarming threat in the world due to unavailability of vaccine and antiviral compounds. The CHIKV nsP2 contains ATPase, RTPase, helicase and protease activities, whereas, nsP1 is a viral capping enzyme. In alphaviruses, the four non-structural proteins form the replication complex in the cytoplasm and this study characterizes the interaction between CHIKV nsP1 and nsP2. It was observed that, both the proteins co-localize in the cytoplasm and interact in the CHIKV infected cells by confocal microscopy and immunoprecipitation assay. Further, it was demonstrated through mutational analysis that, the amino acids 1-95 of nsP2 and 170-288 of nsP1 are responsible for their direct interaction. Additionally, it was noticed that, the ATPase activity of nsP2 is enhanced in the presence of nsP1, indicating the functional significance of this interaction. In silico analysis showed close (≤1.7 Å) polar interaction (hydrogen bond) between Glu

Indexed as

Adenosine TriphosphatasesAnimalsCells, CulturedChikungunya FeverChikungunya virusChlorocebus aethiopsEnzyme ActivationMolecular Docking SimulationMolecular Dynamics SimulationProtein BindingProtein ConformationVero CellsViral Nonstructural ProteinsAdenosine TriphosphatasesViral Nonstructural Proteins

Identifiers

PMID29348627
PMCPMC5773547
OpenAlexW2784227519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.