Evidence map›Paper›PMID 29348167›Full record

ArticleThe Journal of biological chemistry2018

Thiosulfate sulfurtransferase-like domain-containing 1 protein interacts with thioredoxin.

Marouane Libiad, Nicole Motl, David L Akey, Naoya Sakamoto, Eric R Fearon, Janet L Smith, Ruma Banerjee

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Article
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  11. Article
  12. Article
  13. Review
  14. Emerging Chemical Biology of Protein Persulfidation.Antioxidants & redox signaling · 2023
    Review
  15. Review
  16. Review
  17. Article
  18. Glutathione-Related Enzymes and Proteins: A Review.Molecules (Basel, Switzerland) · 2023
    Review
  19. Article
  20. High-LevelOphthalmology science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Marouane LibiadDepartment of Biological Chemistry, University of Michigan Medical Center, Ann Arbor, Michigan 48109.
Nicole MotlDepartment of Biological Chemistry, University of Michigan Medical Center, Ann Arbor, Michigan 48109.
David L AkeyLife Sciences Institute, University of Michigan Medical Center, Ann Arbor, Michigan 48109.
Naoya SakamotoDepartment of Molecular Pathology, Institute of Biomedical and Health Sciences, Hiroshima University, Hiroshima 734-8551, Japan.
Eric R FearonDepartments of Internal Medicine, Human Genetics, and Pathology, University of Michigan Medical Center, Ann Arbor, Michigan 48109.
Janet L SmithDepartment of Biological Chemistry, University of Michigan Medical Center, Ann Arbor, Michigan 48109; Life Sciences Institute, University of Michigan Medical Center, Ann Arbor, Michigan 48109.
Ruma BanerjeeDepartment of Biological Chemistry, University of Michigan Medical Center, Ann Arbor, Michigan 48109. Electronic address: rbanerje@umich.edu.
University of Michigan–Ann Arbor · USHiroshima University · JP

Funding

Cellular Biotechnology Training Program (CBTP)T32GM008353 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCHWENDEMAN, ANNA · 1991 to 2021
$9.3M
Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
Enzymology of Sulfide OxidationR01GM112455 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BANERJEE, RUMA V · 2014 to 2017
$1.2M
Silicon Mechanics Compute ClusterS10OD020011 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SKINIOTIS, GEORGIOS · 2015 to 2015
$490k
NIGMS NIH HHS R01 GM112455NIGMS NIH HHS T32 GM008353NIGMS NIH HHS T32 GM145304NIH HHS S10 OD012289NIH HHS S10 OD020011
6 · The paper itself

Abstract

Rhodanese domains are structural modules present in the sulfurtransferase superfamily. These domains can exist as single units, in tandem repeats, or fused to domains with other activities. Despite their prevalence across species, the specific physiological roles of most sulfurtransferases are not known. Mammalian rhodanese and mercaptopyruvate sulfurtransferase are perhaps the best-studied members of this protein superfamily and are involved in hydrogen sulfide metabolism. The relatively unstudied human thiosulfate sulfurtransferase-like domain-containing 1 (TSTD1) protein, a single-domain cytoplasmic sulfurtransferase, was also postulated to play a role in the sulfide oxidation pathway using thiosulfate to form glutathione persulfide, for subsequent processing in the mitochondrial matrix. Prior kinetic analysis of TSTD1 was performed at pH 9.2, raising questions about relevance and the proposed model for TSTD1 function. In this study, we report a 1.04 Å resolution crystal structure of human TSTD1, which displays an exposed active site that is distinct from that of rhodanese and mercaptopyruvate sulfurtransferase. Kinetic studies with a combination of sulfur donors and acceptors reveal that TSTD1 exhibits a low

Indexed as

Models, MolecularAmino Acid SubstitutionAnimalsBiocatalysisCatalytic DomainColonColorectal NeoplasmsCrystallography, X-RayDatabases, ProteinHumansIntestinal MucosaMutationNADPNeoplasm ProteinsProtein ConformationProtein Interaction Domains and MotifsNADPNeoplasm ProteinsRecombinant ProteinsSaccharomyces cerevisiae ProteinsThioredoxin-Disulfide ReductaseThioredoxinsThiosulfate SulfurtransferaseTSTD1 protein, humancrystal structureenzyme kineticshydrogen sulfidepost-translational modification (PTM)sulfursulfur transferase

Identifiers

PMID29348167
PMCPMC5827441
OpenAlexW2784974269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.