Evidence map›Paper›PMID 29346761›Full record

ArticleCell reports2018

INO80 Chromatin Remodeling Coordinates Metabolic Homeostasis with Cell Division.

Graeme J Gowans, Alicia N Schep, Ka Man Wong, Devin A King, William J Greenleaf, Ashby J Morrison

Abstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Review
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  17. Biomolecules · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Graeme J GowansDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Alicia N SchepDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Ka Man WongDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Devin A KingDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
William J GreenleafDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Ashby J MorrisonDepartment of Biology, Stanford University, Stanford, CA 94305, USA. Electronic address: ashbym@stanford.edu.

Funding

INSTITUTIONAL TRAINING GRANT IN GENOME SCIENCET32HG000044 · NHGRI · STANFORD UNIVERSITY · PI MICHAEL P. SNYDER · 1995 to 2026
$32.2M
The Role of Chromatin in Metabolic Homeostasis SupplementalR35GM119580 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 2016 to 2025
$4.7M
NHGRI NIH HHS T32 HG000044NIGMS NIH HHS R35 GM119580
6 · The paper itself

Abstract

Adaptive survival requires the coordination of nutrient availability with expenditure of cellular resources. For example, in nutrient-limited environments, 50% of all S. cerevisiae genes synchronize and exhibit periodic bursts of expression in coordination with respiration and cell division in the yeast metabolic cycle (YMC). Despite the importance of metabolic and proliferative synchrony, the majority of YMC regulators are currently unknown. Here, we demonstrate that the INO80 chromatin-remodeling complex is required to coordinate respiration and cell division with periodic gene expression. Specifically, INO80 mutants have severe defects in oxygen consumption and promiscuous cell division that is no longer coupled with metabolic status. In mutant cells, chromatin accessibility of periodic genes, including TORC1-responsive genes, is relatively static, concomitant with severely attenuated gene expression. Collectively, these results reveal that the INO80 complex mediates metabolic signaling to chromatin to restrict proliferation to metabolically optimal states.

Indexed as

ATPases Associated with Diverse Cellular ActivitiesCell DivisionChromatinChromatin Assembly and DisassemblyDNA-Binding ProteinsDNA HelicasesHomeostasisATPases Associated with Diverse Cellular ActivitiesChromatinDNA-Binding ProteinsDNA HelicasesINO80 protein, humanAbf1Arp5cell divisionchromatinINO80metabolismMsn2/4Reb1TORC1yeast metabolic cycle

Identifiers

PMID29346761
PMCPMC5949282

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.