Evidence map›Paper›PMID 29343722›Full record

ArticleNature communications2018

Multiplex glycan bead array for high throughput and high content analyses of glycan binding proteins.

Sharad Purohit, Tiehai Li, Wanyi Guan, Xuezheng Song, Jing Song, Yanna Tian, Lei Li, Ashok Sharma, Boying Dun, David Mysona and 5 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Article
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  7. Review
  8. Review
  9. Serum antibody screening using glycan arrays.Chemical Society reviews · 2024
    Review
  10. Analysis of Caenorhabditis Protein Glycosylation.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. GlycoStore: A Platform for H/UPLC and Capillary Electrophoresis Glycan Data.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Sharad PurohitCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
Tiehai LiDepartment of Chemistry, Georgia State University, Atlanta, GA, 30303, USA.
Wanyi GuanDepartment of Chemistry, Georgia State University, Atlanta, GA, 30303, USA.
Xuezheng SongDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Jing SongDepartment of Chemistry, Georgia State University, Atlanta, GA, 30303, USA.
Yanna TianDepartment of Obstetrics and Gynecology, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
Lei LiDepartment of Chemistry, Georgia State University, Atlanta, GA, 30303, USA.
Ashok SharmaCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
Boying DunCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
David MysonaCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
Sharad GhamandeDepartment of Obstetrics and Gynecology, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
Bunja RungruangDepartment of Obstetrics and Gynecology, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA.
Richard D CummingsDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02115, USA.
Peng George WangDepartment of Chemistry, Georgia State University, Atlanta, GA, 30303, USA.
Jin-Xiong SheCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, 1120 15th Street, Augusta, GA, 30912, USA. jshe@augusta.edu.
Augusta University · USGeorgia State University · USAugusta University Health · USEmory University · USHarvard University · US

Funding

Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Luminex multiplex glycan array (LMGA): a high throughput and high content platform for GBPsU01CA221242 · NCI · AUGUSTA UNIVERSITY · PI SHE, JIN-XIONG · 2017 to 2019
$1.4M
Multiplex Luminex glycan array for large scale analyses of glycan-binding proteinsR21CA199868 · NCI · AUGUSTA UNIVERSITY · PI SHE, JIN-XIONG · 2015 to 2016
$526k
NCI NIH HHS R21 CA199868NCI NIH HHS U01 CA221242NIGMS NIH HHS P41 GM103694
6 · The paper itself

Abstract

Glycan-binding proteins (GBPs) play critical roles in diverse cellular functions such as cell adhesion, signal transduction and immune response. Studies of the interaction between GBPs and glycans have been hampered by the availability of high throughput and high-content technologies. Here we report multiplex glycan bead array (MGBA) that allows simultaneous analyses of 384 samples and up to 500 glycans in a single assay. The specificity, sensitivity and reproducibility of MGBA are evaluated using 39 plant lectins, 13 recombinant anti-glycan antibodies, and mammalian GBPs. We demonstrate the utility of this platform by the analyses of natural anti-glycan IgM and IgG antibodies in 961 human serum samples and the discovery of anti-glycan antibody biomarkers for ovarian cancer. Our data indicate that the MGBA platform is particularly suited for large population-based studies that require the analyses of large numbers of samples and glycans.

Indexed as

AntibodiesBiomarkers, TumorFemaleHumansOvarian NeoplasmsPlant LectinsPlantsPolysaccharidesProtein Array AnalysisSmall Molecule LibrariesAntibodiesBiomarkers, TumorPlant LectinsPolysaccharidesSmall Molecule Libraries

Identifiers

PMID29343722
PMCPMC5772357
OpenAlexW2783456737

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.