Evidence map›Paper›PMID 29341594›Full record

ArticleBiochemistry2018

Designing Flavoprotein-GFP Fusion Probes for Analyte-Specific Ratiometric Fluorescence Imaging.

Devin A Hudson, Jeffrey L Caplan, Colin Thorpe

Abstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Devin A HudsonDepartment of Chemistry and Biochemistry, University of Delaware , Newark, Delaware 19716, United States.
Jeffrey L CaplanBioimaging Center, Delaware Biotechnology Institute , Newark, Delaware 19716, United States.
Colin ThorpeDepartment of Chemistry and Biochemistry, University of Delaware , Newark, Delaware 19716, United States.ORCID 0000-0001-8238-0112

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI Anjana Narayan Bhat · 2012 to 2026
$67.2M
Flavoproteins in Oxidative Protein FoldingR01GM026643 · NIGMS · UNIVERSITY OF DELAWARE · PI THORPE, COLIN · 1985 to 2019
$6.6M
Zeiss LSM710 Inverted Confocal MicroscopeS10OD016361 · OD · UNIVERSITY OF DELAWARE · PI CAPLAN, JEFFREY L · 2015 to 2015
$444k
NIGMS NIH HHS P20 GM103446NIGMS NIH HHS R01 GM026643NIH HHS S10 OD016361
6 · The paper itself

Abstract

The development of genetically encoded fluorescent probes for analyte-specific imaging has revolutionized our understanding of intracellular processes. Current classes of intracellular probes depend on the selection of binding domains that either undergo conformational changes on analyte binding or can be linked to thiol redox chemistry. Here we have designed novel probes by fusing a flavoenzyme, whose fluorescence is quenched on reduction by the analyte of interest, with a GFP domain to allow for rapid and specific ratiometric sensing. Two flavoproteins, Escherichia coli thioredoxin reductase and Saccharomyces cerevisiae lipoamide dehydrogenase, were successfully developed into thioredoxin and NAD

Indexed as

Dihydrolipoamide DehydrogenaseEscherichia coliFlavoproteinsGreen Fluorescent ProteinsHEK293 CellsHumansLuminescent AgentsModels, MolecularNADPOptical ImagingOxidation-ReductionRecombinant Fusion ProteinsSaccharomyces cerevisiaeThioredoxin-Disulfide ReductaseThioredoxinsDihydrolipoamide DehydrogenaseFlavoproteinsGreen Fluorescent ProteinsLuminescent AgentsNADPRecombinant Fusion ProteinsThioredoxin-Disulfide ReductaseThioredoxins

Identifiers

PMID29341594
PMCPMC5820181

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.