Evidence map›Paper›PMID 29340583›Full record

ArticleGlycobiology2018

Functional analysis of the Helicobacter pullorum N-linked protein glycosylation system.

Adrian J Jervis, Alison G Wood, Joel A Cain, Jonathan A Butler, Helen Frost, Elizabeth Lord, Rebecca Langdon, Stuart J Cordwell, Brendan W Wren, Dennis Linton

Open access · hybridAbstract read
In one paragraph

Article in Glycobiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Adrian J JervisManchester Institute of Biotechnology, SYNBIOCHEM, University of Manchester, Manchester, UK.
Alison G WoodDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK.
Joel A CainSchool of Molecular Bioscience and Charles Perkins Centre, The University of Sydney, 2006Australia.
Jonathan A ButlerSchool of Healthcare Science, Manchester Metropolitan University, Manchester M1 5GD, UK.
Helen FrostFaculty of Biology, Medicine and Health, Michael Smith Building, University of Manchester, Manchester M13 9PT, UK.
Elizabeth LordFaculty of Biology, Medicine and Health, Michael Smith Building, University of Manchester, Manchester M13 9PT, UK.
Rebecca LangdonPathogen Molecular Biology Unit, London School of Hygiene and Tropical Medicine, London WC1E 7HT, UK.
Stuart J CordwellSchool of Molecular Bioscience and Charles Perkins Centre, The University of Sydney, 2006Australia.
Brendan W WrenPathogen Molecular Biology Unit, London School of Hygiene and Tropical Medicine, London WC1E 7HT, UK.
Dennis LintonFaculty of Biology, Medicine and Health, Michael Smith Building, University of Manchester, Manchester M13 9PT, UK.
University of Manchester · GBUniversity of Sydney · AULondon School of Hygiene & Tropical Medicine · GBManchester Metropolitan University · GBUniversity of London · GBUniversity of Sheffield · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F009321/1Biotechnology and Biological Sciences Research Council BB/H017437/1Biotechnology and Biological Sciences Research Council BB/H017542/1Biotechnology and Biological Sciences Research Council BBS/B/04862Biotechnology and Biological Sciences Research Council E20372Biotechnology and Biological Sciences Research Council EGA16167Wellcome Trust 102979/Z/13/Z
6 · The paper itself

Abstract

N-linked protein glycosylation systems operate in species from all three domains of life. The model bacterial N-linked glycosylation system from Campylobacter jejuni is encoded by pgl genes present at a single chromosomal locus. This gene cluster includes the pglB oligosaccharyltransferase responsible for transfer of glycan from lipid carrier to protein. Although all genomes from species of the Campylobacter genus contain a pgl locus, among the related Helicobacter genus only three evolutionarily related species (H. pullorum, H. canadensis and H. winghamensis) potentially encode N-linked protein glycosylation systems. Helicobacter putative pgl genes are scattered in five chromosomal loci and include two putative oligosaccharyltransferase-encoding pglB genes per genome. We have previously demonstrated the in vitro N-linked glycosylation activity of H. pullorum resulting in transfer of a pentasaccharide to a peptide at asparagine within the sequon (D/E)XNXS/T. In this study, we identified the first H. pullorum N-linked glycoprotein, termed HgpA. Production of histidine-tagged HgpA in the background of insertional knockout mutants of H. pullorum pgl/wbp genes followed by analysis of HgpA glycan structures demonstrated the role of individual gene products in the PglB1-dependent N-linked protein glycosylation pathway. Glycopeptide purification by zwitterionic-hydrophilic interaction liquid chromatography coupled with tandem mass spectrometry identified six glycosites from five H. pullorum proteins, which was consistent with proteins reactive with a polyclonal antiserum generated against glycosylated HgpA. This study demonstrates functioning of a H. pullorum N-linked general protein glycosylation system.

Indexed as

Bacterial ProteinsCarrier ProteinsGlycosylationHelicobacterBacterial ProteinsCarrier Proteinshemoglobin-binding protein, bacteria

Identifiers

PMID29340583
PMCPMC6025236
OpenAlexW2782842458

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.