Evidence map›Paper›PMID 29340222›Full record

ArticleActa naturae

Direct Molecular Fishing of New Protein Partners for Human Thromboxane Synthase.

A V Svirid, P V Ershov, E O Yablokov, L A Kaluzhskiy, Yu V Mezentsev, A V Florinskaya, T A Sushko, N V Strushkevich, A A Gilep, S A Usanov and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Acta naturae. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

A V SviridInstitute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Akad. Kuprevicha Str. 5 /2, Minsk, 220141, Belarus.
P V ErshovInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
E O YablokovInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
L A KaluzhskiyInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
Yu V MezentsevInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
A V FlorinskayaInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
T A SushkoInstitute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Akad. Kuprevicha Str. 5 /2, Minsk, 220141, Belarus.
N V StrushkevichInstitute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Akad. Kuprevicha Str. 5 /2, Minsk, 220141, Belarus.
A A GilepInstitute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Akad. Kuprevicha Str. 5 /2, Minsk, 220141, Belarus.
S A UsanovInstitute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Akad. Kuprevicha Str. 5 /2, Minsk, 220141, Belarus.
A E MedvedevInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
A S IvanovInstitute of Biomedical Chemistry, Pogodinskaya Street 10, bldg. 8, Moscow, 119121, Russia.
Institute of Biomedical Chemistry · RUNational Academy of Sciences of Belarus · BYInstitute of Bioorganic Chemistry · BY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thromboxane synthase (TBXAS1) catalyzes the isomerization reaction of prostaglandin H2 producing thromboxane A2, the autocrine and paracrine factor in many cell types. A high activity and metastability by these arachidonic acid derivatives suggests the existence of supramolecular structures that are involved in the regulation of the biosynthesis and directed translocation of thromboxane to the receptor. The objective of this study was to identify TBXAS1 protein partners from human liver tissue lysate using a complex approach based on the direct molecular fishing technique, LC-MS/MS protein identification, and protein-protein interaction validation by surface plasmon resonance (SPR). As a result, 12 potential TBXAS1 protein partners were identified, including the components regulating cytoskeleton organization (BBIP1 and ANKMY1), components of the coagulation cascade of human blood (SERPINA1, SERPINA3, APOH, FGA, and FN1), and the enzyme involved in the metabolism of xenobiotics and endogenous bioregulators (CYP2E1). SPR validation on the Biacore 3000 biosensor confirmed the effectiveness of the interaction between CYP2E1 (the enzyme that converts prostaglandin H2 to 12-HHT/thromboxane A2 proantagonist) and TBXAS1 (

Indexed as

cytochrome P450direct molecular fishingisatinprotein partnerssurface plasmon resonanceThromboxane synthase (CYP5A1, TBXAS1)

Identifiers

PMID29340222
PMCPMC5762833
OpenAlexW2918179987

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.