Evidence map›Paper›PMID 29340104›Full record

ArticleOncotarget2017

Somatic mutation dynamics in MDS patients treated with azacitidine indicate clonal selection in patients-responders.

Kamila Polgarova, Karina Vargova, Vojtech Kulvait, Nina Dusilkova, Lubomir Minarik, Zuzana Zemanova, Michal Pesta, Anna Jonasova, Tomas Stopka

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Kamila PolgarovaDepartment Biocev, First Faculty of Medicine, Charles University, Vestec, Czech Republic.
Karina VargovaDepartment of Pathophysiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Vojtech KulvaitDepartment Biocev, First Faculty of Medicine, Charles University, Vestec, Czech Republic.
Nina DusilkovaDepartment Biocev, First Faculty of Medicine, Charles University, Vestec, Czech Republic.
Lubomir MinarikDepartment Biocev, First Faculty of Medicine, Charles University, Vestec, Czech Republic.
Zuzana ZemanovaDepartment of Cytogenetics, First Faculty of Medicine and General Hospital, Charles University, Prague, Czech Republic.
Michal PestaFaculty of Mathematics and Physics, Charles University, Prague, Czech Republic.
Anna JonasovaDepartment of Haematology, First Faculty of Medicine and General Hospital, Charles University, Prague, Czech Republic.
Tomas StopkaDepartment Biocev, First Faculty of Medicine, Charles University, Vestec, Czech Republic.
Charles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Azacitidine (AZA) for higher risk MDS patients is a standard therapy with limited durability. To monitor mutation dynamics during AZA therapy we utilized massive parallel sequencing of 54 genes previously associated with MDS/AML pathogenesis. Serial sampling before and during AZA therapy of 38 patients (reaching median overall survival 24 months (Mo) with 60% clinical responses) identified 116 somatic pathogenic variants with allele frequency (VAF) exceeding 5%. High accuracy of data was achieved via duplicate libraries from myeloid cells and T-cell controls. We observed that nearly half of the variants were stable while other variants were highly dynamic. Patients with marked decrease of allelic burden upon AZA therapy achieved clinical responses. In contrast, early-progressing patients on AZA displayed minimal changes of the mutation pattern. We modeled the VAF dynamics on AZA and utilized a joint model for the overall survival and response duration. While the presence of certain variants associated with clinical outcomes, such as the mutations of

Indexed as

AMLazacitidineMDSNGSsomatic mutation

Identifiers

PMID29340104
PMCPMC5762372
OpenAlexW2774817448

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.