Evidence map›Paper›PMID 29339518›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Iterative optimization yields Mcl-1-targeting stapled peptides with selective cytotoxicity to Mcl-1-dependent cancer cells.

Raheleh Rezaei Araghi, Gregory H Bird, Jeremy A Ryan, Justin M Jenson, Marina Godes, Jonathan R Pritz, Robert A Grant, Anthony Letai, Loren D Walensky, Amy E Keating

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
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  4. De novo discovery of a molecular glue-like macrocyclic peptide that induces MCL1 homodimerization.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  7. Modeling the Binding of Anticancer Peptides and Mcl-1.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Raheleh Rezaei AraghiDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139.
Gregory H BirdDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Jeremy A RyanDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Justin M JensonDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139.
Marina GodesDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Jonathan R PritzDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Robert A GrantDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139.
Anthony LetaiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Loren D WalenskyDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02215; Loren_Walensky@dfci.harvard.edu keating@mit.edu.
Amy E KeatingDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139; Loren_Walensky@dfci.harvard.edu keating@mit.edu.
Dana-Farber Cancer Institute · USMassachusetts Institute of Technology · US

Funding

Dissecting and Targeting Deregulated Mitochondrial Apoptosis in Human CancerR35CA197583 · NCI · DANA-FARBER CANCER INST · PI Loren David Walensky · 2015 to 2026
$12.5M
Stapled Peptides for Protein Interaction Research and Therapeutic Targeting in Human CancerR50CA211399 · NCI · DANA-FARBER CANCER INST · PI Gregory Howard Bird · 2016 to 2026
$3.2M
Computationally guided design of helical peptide interaction reagentsR01GM110048 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KEATING, AMY E · 2014 to 2020
$1.8M
Biophysical and Mechanistic Determinants for Cancer Cell Import of Hydrocarbon-Stapled PeptidesR21CA209358 · NCI · DANA-FARBER CANCER INST · PI WALENSKY, LOREN DAVID · 2016 to 2017
$419k
NCI NIH HHS R21 CA209358NCI NIH HHS R35 CA197583NCI NIH HHS R50 CA211399NIGMS NIH HHS R01 GM110048
6 · The paper itself

Abstract

Bcl-2 family proteins regulate apoptosis, and aberrant interactions of overexpressed antiapoptotic family members such as Mcl-1 promote cell transformation, cancer survival, and resistance to chemotherapy. Discovering potent and selective Mcl-1 inhibitors that can relieve apoptotic blockades is thus a high priority for cancer research. An attractive strategy for disabling Mcl-1 involves using designer peptides to competitively engage its binding groove, mimicking the structural mechanism of action of native sensitizer BH3-only proteins. We transformed Mcl-1-binding peptides into α-helical, cell-penetrating constructs that are selectively cytotoxic to Mcl-1-dependent cancer cells. Critical to the design of effective inhibitors was our introduction of an all-hydrocarbon cross-link or "staple" that stabilizes α-helical structure, increases target binding affinity, and independently confers binding specificity for Mcl-1 over related Bcl-2 family paralogs. Two crystal structures of complexes at 1.4 Å and 1.9 Å resolution demonstrate how the hydrophobic staple induces an unanticipated structural rearrangement in Mcl-1 upon binding. Systematic sampling of staple location and iterative optimization of peptide sequence in accordance with established design principles provided peptides that target intracellular Mcl-1. This work provides proof of concept for the development of potent, selective, and cell-permeable stapled peptides for therapeutic targeting of Mcl-1 in cancer, applying a design and validation workflow applicable to a host of challenging biomedical targets.

Indexed as

AnimalsBinding SitesCell LineCell SurvivalCircular DichroismCrystallography, X-RayCytoplasmDrug DesignHumansHydrophobic and Hydrophilic InteractionsInhibitory Concentration 50MiceMutationMyeloid Cell Leukemia Sequence 1 ProteinNeoplasmsPeptidesMCL1 protein, humanMcl1 protein, mouseMyeloid Cell Leukemia Sequence 1 ProteinPeptidesapoptosisBH3 mimeticinhibitorMcl-1stapled peptide

Identifiers

PMID29339518
PMCPMC5798337
OpenAlexW2783254868

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.